logo added

README.md

@@ -1,4 +1,7 @@
 # PhasicFlow
+<div align="center">
+<img src="doc/phasicFlow_logo_github.png" width="300">
+</div>
 PhasicFlow is a parallel C++ code for performing DEM simulations. It can run on shared-memory multi-core computational units such as multi-core CPUs or GPUs (for now it works on CUDA-enabled GPUs). The parallelization method mainly relies on loop-level parallelization on a shared-memory computational unit. You can build and run PhasicFlow in serial mode on regular PCs, in parallel mode for multi-core CPUs, or build it for a GPU device to off-load computations to a GPU. In its current statues you can simulate millions of particles (up to 32M particles tested) on a single desktop computer. You can see the [performance tests of PhasicFlow](https://github.com/PhasicFlow/phasicFlow/wiki/Performance-of-phasicFlow) in the wiki page. 
 
 # How to build?

doc/Doxyfile

@@ -51,7 +51,7 @@ PROJECT_BRIEF          = www.cemf.ir
 # pixels and the maximum width should not exceed 200 pixels. Doxygen will copy
 # the logo to the output directory.
 
-PROJECT_LOGO           =
+PROJECT_LOGO           = /home/hrn/PhasicFlow/phasicFlow/doc/phasicFlow_logo.png
 
 # The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute) path
 # into which the generated documentation will be written. If a relative path is

doc/customdoxygen.css

@@ -1,7 +1,6 @@
 #titlearea
 {
     background-color: rgb(243, 243, 243);
-    height: 120px;
     padding-top: 8px;
 }
 
@@ -37,6 +36,7 @@
 #projectbrief
 {
     font-size: 150%;
+    padding-left: 15px;
 }
 
 #projectbrief a

doc/footer.html

@@ -6,9 +6,12 @@
     <img class="footer" src="$relpath^doxygen.png" alt="doxygen"/></a> $doxygenversion </li>
   </ul>
 </div>
+
 <!--END GENERATE_TREEVIEW-->
 <!--BEGIN !GENERATE_TREEVIEW-->
-<hr class="footer"/><address class="footer"><small>
+<hr class="footer"/>
+<address class="footer">
+<small>
 $generatedby &#160;<a href="http://www.doxygen.org/index.html">
 <img class="footer" src="$relpath^doxygen.png" alt="doxygen"/>
 </a> $doxygenversion

doc/header.html

@@ -20,33 +20,21 @@ $extrastylesheet
 
 <!--BEGIN TITLEAREA-->
 <div id="titlearea">
-<table cellspacing="0" cellpadding="0">
+<table cellspacing="0" >
  <tbody>
- <tr style="height: 56px;">
+ <tr>
   <!--BEGIN PROJECT_LOGO-->
-  <td id="projectlogo"><img alt="Logo" src="$relpath^$projectlogo"/></td>
+    <td id="projectlogo"><a href="https://github.com/PhasicFlow"><img alt="Logo" src="$relpath^$projectlogo"></a></td>
   <!--END PROJECT_LOGO-->
-  <!--BEGIN PROJECT_NAME-->
-  <td id="projectalign" style="padding-left: 0.5em;">
-   <div id="projectname"><a href="www.github.com/PhasicFlow">$projectname</a>
-   <!--BEGIN PROJECT_NUMBER-->&#160;<span id="projectnumber"><a href="www.github.com/PhasicFlow">$projectnumber</a></span><!--END PROJECT_NUMBER-->
-   </div>
-   <!--BEGIN PROJECT_BRIEF--><div id="projectbrief"><a href="https://cemf.ir">$projectbrief</a></div><!--END PROJECT_BRIEF-->
-  </td>
-  <!--END PROJECT_NAME-->
-  <!--BEGIN !PROJECT_NAME-->
-   <!--BEGIN PROJECT_BRIEF-->
-    <td style="padding-left: 0.5em;">
-    <div id="projectbrief">$projectbrief</div>
-    </td>
-   <!--END PROJECT_BRIEF-->
-  <!--END !PROJECT_NAME-->
-  <!--BEGIN DISABLE_INDEX-->
    <!--BEGIN SEARCHENGINE-->
    <td>$searchbox</td>
    <!--END SEARCHENGINE-->
-  <!--END DISABLE_INDEX-->
  </tr>
+<tr>
+  <td id="projectbrief">
+    <a href="https://https://cemf.ir">www.cemf.ir</a>
+  </td>
+</tr>
  </tbody>
 </table>
 </div>