diff --git a/.gitignore b/.gitignore
index fccdff9c..badc0661 100644
--- a/.gitignore
+++ b/.gitignore
@@ -61,3 +61,8 @@ doc/DTAGS
**/[0-9]*.[0-9][0-9][0-9][0-9][0-9][0-9][0-9]
**/[0-9]*.[0-9][0-9][0-9][0-9][0-9][0-9][0-9][0-9]
**/VTK
+utilities/postprocessPhasicFlow/includeMask.hpp
+utilities/postprocessPhasicFlow/ProcessField.hpp
+utilities/postprocessPhasicFlow/ProcessField.hpp
+*.hpp
+*.cpp
diff --git a/tutorials/sphereGranFlow/RotatingDrumWithBaffles/caseSetup/interaction b/tutorials/sphereGranFlow/RotatingDrumWithBaffles/caseSetup/interaction
index fc7dc5a1..a12c6914 100644
--- a/tutorials/sphereGranFlow/RotatingDrumWithBaffles/caseSetup/interaction
+++ b/tutorials/sphereGranFlow/RotatingDrumWithBaffles/caseSetup/interaction
@@ -62,7 +62,7 @@ contactSearch
NBSInfo
{
- // each 20 timesteps, update neighbor list
+ // each 20 timesteps, update neighbor list
updateFrequency 10;
// bounding box size to particle diameter (max)
sizeRatio 1.1;
diff --git a/tutorials/sphereGranFlow/RotatingDrumWithBaffles/settings/geometryDict b/tutorials/sphereGranFlow/RotatingDrumWithBaffles/settings/geometryDict
index 5485c307..9f962330 100644
--- a/tutorials/sphereGranFlow/RotatingDrumWithBaffles/settings/geometryDict
+++ b/tutorials/sphereGranFlow/RotatingDrumWithBaffles/settings/geometryDict
@@ -14,66 +14,66 @@ surfaces
{
body
{
- // type of the wall
+// type of the wall
type stlWall;
- // file name in stl folder
+// file name in stl folder
file Body.stl;
- // material name of this wall
+// material name of this wall
material wallMat;
- // motion component name
+// motion component name
motion rotAxis;
}
/* This is a Cylinder Wall at the rear of cylinder */
rearEnd
{
- // type of the wall
+// type of the wall
type cylinderWall;
- // first point for the axis of rotation
+// first point for the axis of rotation
p1 (-0.1974 0.2269 -0.001);
- // second point for the axis of rotation
+// second point for the axis of rotation
p2 (-0.1974 0.2269 0.0);
- // Radius of p1
+// Radius of p1
radius1 0.0001;
- // Radius of p2
+// Radius of p2
radius2 0.12;
- // material name of the wall
+// material name of the wall
material wallMat;
- // motion component name
+// motion component name
motion rotAxis;
}
/* This a cylinder Wall at the front of Cylinder */
frontEnd
{
- // type of the wall
+// type of the wall
type cylinderWall;
- // first point for the axis of rotation
+// first point for the axis of rotation
p1 (-0.1974 0.2269 0.0989);
- // second point for the axis of rotation
+// second point for the axis of rotation
p2 (-0.1974 0.2269 0.0990);
- // Radius of p1
+// Radius of p1
radius1 0.0001;
- // Radius of p2
+// Radius of p2
radius2 0.12;
- // material name of the wall
+// material name of the wall
material wallMat;
- // motion component name
+// motion component name
motion rotAxis;
}
}
- // information for rotatingAxisMotion motion model
+// information for rotatingAxisMotion motion model
rotatingAxisMotionInfo
{
rotAxis
{
- // first point for the axis of rotation
+// first point for the axis of rotation
p1 (-0.1974 0.2269 0);
- // second point for the axis of rotation
+// second point for the axis of rotation
p2 (-0.1974 0.2269 0.1);
- // rotation speed (rad/s) => 15 rpm
+// rotation speed (rad/s) => 15 rpm
omega 2.38733;
- // Start time of Geometry Rotating
+// Start time of Geometry Rotating
startTime 2;
- // End time of Geometry Rotating
+// End time of Geometry Rotating
endTime 9.5;
}
}
diff --git a/tutorials/sphereGranFlow/toteBlender/ReadMe.md b/tutorials/sphereGranFlow/toteBlender/ReadMe.md
new file mode 100644
index 00000000..4a9ff9bf
--- /dev/null
+++ b/tutorials/sphereGranFlow/toteBlender/ReadMe.md
@@ -0,0 +1,244 @@
+# Problem Definition
+The problem is to simulate a double pedestal tote blender with the diameter **0.03 m** and **0.1 m** respectively, the length **0.3 m**, rotating at **28 rpm**. This blender is filled with **20000** Particles. The timestep for integration is **0.00001 s**. There is one type of Particle in this blender that are being inserted during simulation to fill the drum.
+* **20000** particles with **4 mm** diameter, at the rate of 20000 particles/s for 1 sec.
+
+
+
+
+ a view of the tote-blender while rotating
+
+
+

+
+
+
+
+# Setting up the Case
+As it has been explained in the previous cases, the simulation case setup is based on text-based scripts. Here, the simulation case setup are sotred in two folders: `caseSetup`, `setting`. (see the above folders). Unlike the previous cases, this case does not have the `stl` file. and the geometry is described in the `geometryDict` file.
+
+## Defining particles
+Then in the `caseSetup/sphereShape` the diameter and the material name of the particles are defined.
+```C++
+// names of shapes
+names (sphere1);
+// diameter of shapes (m)
+diameters (0.004);
+// material names for shapes
+materials (prop1);
+```
+## Particle Insertion
+In this case we have a region for ordering particles. These particles are placed in this blender. For example the script for the inserted particles is shown below.
+
+
+in caseSetup/particleInsertion file
+
+
+```C++
+// positions particles
+positionParticles
+{
+// ordered positioning
+ method positionOrdered;
+// maximum number of particles in the simulation
+ maxNumberOfParticles 40000;
+// perform initial sorting based on morton code?
+ mortonSorting Yes;
+// box for positioning particles
+ box
+ {
+// lower corner point of the box
+ min (-0.06 -0.06 0.08);
+// upper corner point of the box
+ max (0.06 0.06 0.18);
+ }
+```
+ ## Interaction between particles
+ In `caseSetup/interaction` file, material names and properties and interaction parameters are defined: interaction between the particles of rotating drum. Since we are defining 1 material for simulation, the interaction matrix is 1x1 (interactions are symetric).
+```C++
+ // a list of materials names
+materials (prop1);
+// density of materials [kg/m3]
+densities (1000.0);
+
+contactListType sortedContactList;
+
+model
+{
+ contactForceModel nonLinearNonLimited;
+ rollingFrictionModel normal;
+ /*
+ Property (prop1-prop1);
+ */
+// Young modulus [Pa]
+ Yeff (1.0e6);
+// Shear modulus [Pa]
+ Geff (0.8e6);
+// Poisson's ratio [-]
+ nu (0.25);
+// coefficient of normal restitution
+ en (0.7);
+// coefficient of tangential restitution
+ et (1.0);
+// dynamic friction
+ mu (0.3);
+// rolling friction
+ mur (0.1);
+
+}
+```
+## Settings
+### Geometry
+In the `settings/geometryDict` file, the geometry and axis of rotation is defined for the drum. The geometry is composed of a cylinder inlet and outlet, cone shell top and down, a cylinder shell and enter and exit Gate.
+```C++
+surfaces
+{
+ enterGate
+ {
+ // type of wall
+ type planeWall;
+ // coords of wall
+ p1 (-0.05 -0.05 0.3);
+ p2 (-0.05 0.05 0.3);
+ p3 ( 0.05 0.05 0.3);
+ p4 (0.05 -0.05 0.3);
+ // material of wall
+ material prop1;
+ // motion component name
+ motion rotAxis;
+ }
+
+ cylinderinlet
+ {
+ // type of the wall
+ type cylinderWall;
+ // begin point of cylinder axis
+ p1 (0.0 0.0 0.28);
+ // end point of cylinder axis
+ p2 (0.0 0.0 0.3);
+ // radius at p1
+ radius1 0.03;
+ // radius at p2
+ radius2 0.03;
+ // number of divisions
+ resolution 36;
+ // material name of this wall
+ material prop1;
+ // motion component name
+ motion rotAxis;
+ }
+
+ coneShelltop
+ {
+ // type of the wall
+ type cylinderWall;
+ // begin point of cylinder axis
+ p1 (0.0 0.0 0.2);
+ // end point of cylinder axis
+ p2 (0.0 0.0 0.28);
+ // radius at p1
+ radius1 0.1;
+ // radius at p2
+ radius2 0.03;
+ // number of divisions
+ resolution 36;
+ // material name of this wall
+ material prop1;
+ // motion component name
+ motion rotAxis;
+ }
+
+ cylinderShell
+ {
+ // type of the wall
+ type cylinderWall;
+ // begin point of cylinder axis
+ p1 (0.0 0.0 0.1);
+ // end point of cylinder axis
+ p2 (0.0 0.0 0.2);
+ // radius at p1
+ radius1 0.1;
+ // radius at p2
+ radius2 0.1;
+ // number of divisions
+ resolution 36;
+ // material name of this wall
+ material prop1;
+ // motion component name
+ motion rotAxis;
+ }
+
+ coneShelldown
+ {
+ // type of the wall
+ type cylinderWall;
+ // begin point of cylinder axis
+ p1 (0.0 0.0 0.02);
+ // end point of cylinder axis
+ p2 (0.0 0.0 0.1);
+ // radius at p1
+ radius1 0.03;
+ // radius at p2
+ radius2 0.1;
+ // number of divisions
+ resolution 36;
+ // material name of this wall
+ material prop1;
+ // motion component name
+ motion rotAxis;
+ }
+ /*
+ This is a plane wall at the exit of silo
+ */
+
+ cylinderoutlet
+ {
+ // type of the wall
+ type cylinderWall;
+ // begin point of cylinder axis
+ p1 (0.0 0.0 0.0);
+ // end point of cylinder axis
+ p2 (0.0 0.0 0.02);
+ // radius at p1
+ radius1 0.03;
+ // radius at p2
+ radius2 0.03;
+ // number of divisions
+ resolution 36;
+ // material name of this wall
+ material prop1;
+ // motion component name
+ motion rotAxis;
+ }
+ exitGate
+ {
+ type planeWall;
+ p1 (-0.05 -0.05 0);
+ p2 (-0.05 0.05 0);
+ p3 ( 0.05 0.05 0);
+ p4 (0.05 -0.05 0);
+ material prop1;
+ motion rotAxis;
+ }
+
+}
+```
+### Rotating Axis Info
+In this part of `geometryDict` the information of rotating axis and speed of rotation are defined. Unlike the previous cases, the rotation of this blender starts at time=**0 s**.
+```C++
+rotatingAxisMotionInfo
+{
+ rotAxis
+ {
+ p1 (-0.1 0.0 0.15); // first point for the axis of rotation
+ p2 (0.1 0.0 0.15); // second point for the axis of rotation
+ omega 3; // rotation speed (rad/s)
+ }
+}
+```
+## Performing Simulation
+To perform simulations, enter the following commands one after another in the terminal.
+
+Enter `$ particlesPhasicFlow` command to create the initial fields for particles.
+Enter `$ geometryPhasicFlow` command to create the Geometry.
+At last, enter `$ sphereGranFlow` command to start the simulation.
+After finishing the simulation, you can use `$ pFlowtoVTK` to convert the results into vtk format storred in ./VTK folder.
\ No newline at end of file
diff --git a/tutorials/sphereGranFlow/toteBlender/caseSetup/interaction b/tutorials/sphereGranFlow/toteBlender/caseSetup/interaction
new file mode 100644
index 00000000..f97d2f4f
--- /dev/null
+++ b/tutorials/sphereGranFlow/toteBlender/caseSetup/interaction
@@ -0,0 +1,61 @@
+/* -------------------------------*- C++ -*--------------------------------- *\
+| phasicFlow File |
+| copyright: www.cemf.ir |
+\* ------------------------------------------------------------------------- */
+objectName interaction;
+objectType dicrionary;
+/* ------------------------------------------------------------------------- */
+// a list of materials names
+materials (prop1);
+// density of materials [kg/m3]
+densities (1000.0);
+
+contactListType sortedContactList;
+
+model
+{
+ contactForceModel nonLinearNonLimited;
+ rollingFrictionModel normal;
+ /*
+ Property (prop1-prop1);
+ */
+// Young modulus [Pa]
+ Yeff (1.0e6);
+// Shear modulus [Pa]
+ Geff (0.8e6);
+// Poisson's ratio [-]
+ nu (0.25);
+// coefficient of normal restitution
+ en (0.7);
+// coefficient of tangential restitution
+ et (1.0);
+// dynamic friction
+ mu (0.3);
+// rolling friction
+ mur (0.1);
+
+}
+contactSearch
+{
+// method for broad search particle-particle
+ method NBS;
+// method for broad search particle-wall
+ wallMapping cellMapping;
+
+ NBSInfo
+ {
+ // each 20 timesteps, update neighbor list
+ updateFrequency 20;
+ // bounding box size to particle diameter (max)
+ sizeRatio 1.1;
+ }
+
+ cellMappingInfo
+ {
+ // each 20 timesteps, update neighbor list
+ updateFrequency 20;
+ // bounding box for particle-wall search (> 0.5)
+ cellExtent 0.7;
+ }
+
+}
\ No newline at end of file
diff --git a/tutorials/sphereGranFlow/toteBlender/caseSetup/particleInsertion b/tutorials/sphereGranFlow/toteBlender/caseSetup/particleInsertion
new file mode 100644
index 00000000..d8f022c6
--- /dev/null
+++ b/tutorials/sphereGranFlow/toteBlender/caseSetup/particleInsertion
@@ -0,0 +1,13 @@
+/* -------------------------------*- C++ -*--------------------------------- *\
+| phasicFlow File |
+| copyright: www.cemf.ir |
+\* ------------------------------------------------------------------------- */
+objectName particleInsertion;
+objectType dicrionary;
+/* ------------------------------------------------------------------------- */
+// is insertion active?
+active no;
+// not implemented for yes
+collisionCheck No;
+
+
diff --git a/tutorials/sphereGranFlow/toteBlender/caseSetup/sphereShape b/tutorials/sphereGranFlow/toteBlender/caseSetup/sphereShape
new file mode 100644
index 00000000..ff2df8d1
--- /dev/null
+++ b/tutorials/sphereGranFlow/toteBlender/caseSetup/sphereShape
@@ -0,0 +1,13 @@
+/* -------------------------------*- C++ -*--------------------------------- *\
+| phasicFlow File |
+| copyright: www.cemf.ir |
+\* ------------------------------------------------------------------------- */
+objectName sphereDict;
+objectType sphereShape;
+/* ------------------------------------------------------------------------- */
+// names of shapes
+names (sphere1);
+// diameter of shapes (m)
+diameters (0.004);
+// material names for shapes
+materials (prop1);
\ No newline at end of file
diff --git a/tutorials/sphereGranFlow/toteBlender/cleanThisCase b/tutorials/sphereGranFlow/toteBlender/cleanThisCase
new file mode 100644
index 00000000..8a0ab919
--- /dev/null
+++ b/tutorials/sphereGranFlow/toteBlender/cleanThisCase
@@ -0,0 +1,7 @@
+#!/bin/sh
+cd ${0%/*} || exit 1 # Run from this directory
+
+ls | grep -P "^(([0-9]+\.?[0-9]*)|(\.[0-9]+))$" | xargs -d"\n" rm -rf
+rm -rf VTK
+
+#------------------------------------------------------------------------------
diff --git a/tutorials/sphereGranFlow/toteBlender/runThisCase b/tutorials/sphereGranFlow/toteBlender/runThisCase
new file mode 100644
index 00000000..c48d71fe
--- /dev/null
+++ b/tutorials/sphereGranFlow/toteBlender/runThisCase
@@ -0,0 +1,21 @@
+#!/bin/sh
+cd ${0%/*} || exit 1 # Run from this directory
+echo "\n<--------------------------------------------------------------------->"
+echo "1) Creating particles"
+echo "<--------------------------------------------------------------------->\n"
+particlesPhasicFlow
+
+echo "\n<--------------------------------------------------------------------->"
+echo "2) Creating geometry"
+echo "<--------------------------------------------------------------------->\n"
+geometryPhasicFlow
+
+echo "\n<--------------------------------------------------------------------->"
+echo "3) Running the case"
+echo "<--------------------------------------------------------------------->\n"
+sphereGranFlow
+
+
+
+
+#------------------------------------------------------------------------------
diff --git a/tutorials/sphereGranFlow/toteBlender/settings/geometryDict b/tutorials/sphereGranFlow/toteBlender/settings/geometryDict
new file mode 100644
index 00000000..49d486bd
--- /dev/null
+++ b/tutorials/sphereGranFlow/toteBlender/settings/geometryDict
@@ -0,0 +1,151 @@
+/* -------------------------------*- C++ -*--------------------------------- *\
+| phasicFlow File |
+| copyright: www.cemf.ir |
+\* ------------------------------------------------------------------------- */
+objectName geometryDict;
+objectType dictionary;
+/* ------------------------------------------------------------------------- */
+// motion model: rotating object around an axis
+motionModel rotatingAxisMotion;
+
+surfaces
+{
+ enterGate
+ {
+ // type of wall
+ type planeWall;
+ // coords of wall
+ p1 (-0.05 -0.05 0.3);
+ p2 (-0.05 0.05 0.3);
+ p3 ( 0.05 0.05 0.3);
+ p4 (0.05 -0.05 0.3);
+ // material of wall
+ material prop1;
+ // motion component name
+ motion rotAxis;
+ }
+
+ cylinderinlet
+ {
+ // type of the wall
+ type cylinderWall;
+ // begin point of cylinder axis
+ p1 (0.0 0.0 0.28);
+ // end point of cylinder axis
+ p2 (0.0 0.0 0.3);
+ // radius at p1
+ radius1 0.03;
+ // radius at p2
+ radius2 0.03;
+ // number of divisions
+ resolution 36;
+ // material name of this wall
+ material prop1;
+ // motion component name
+ motion rotAxis;
+ }
+
+ coneShelltop
+ {
+ // type of the wall
+ type cylinderWall;
+ // begin point of cylinder axis
+ p1 (0.0 0.0 0.2);
+ // end point of cylinder axis
+ p2 (0.0 0.0 0.28);
+ // radius at p1
+ radius1 0.1;
+ // radius at p2
+ radius2 0.03;
+ // number of divisions
+ resolution 36;
+ // material name of this wall
+ material prop1;
+ // motion component name
+ motion rotAxis;
+ }
+
+ cylinderShell
+ {
+ // type of the wall
+ type cylinderWall;
+ // begin point of cylinder axis
+ p1 (0.0 0.0 0.1);
+ // end point of cylinder axis
+ p2 (0.0 0.0 0.2);
+ // radius at p1
+ radius1 0.1;
+ // radius at p2
+ radius2 0.1;
+ // number of divisions
+ resolution 36;
+ // material name of this wall
+ material prop1;
+ // motion component name
+ motion rotAxis;
+ }
+
+ coneShelldown
+ {
+ // type of the wall
+ type cylinderWall;
+ // begin point of cylinder axis
+ p1 (0.0 0.0 0.02);
+ // end point of cylinder axis
+ p2 (0.0 0.0 0.1);
+ // radius at p1
+ radius1 0.03;
+ // radius at p2
+ radius2 0.1;
+ // number of divisions
+ resolution 36;
+ // material name of this wall
+ material prop1;
+ // motion component name
+ motion rotAxis;
+ }
+ /*
+ This is a plane wall at the exit of silo
+ */
+
+ cylinderoutlet
+ {
+ // type of the wall
+ type cylinderWall;
+ // begin point of cylinder axis
+ p1 (0.0 0.0 0.0);
+ // end point of cylinder axis
+ p2 (0.0 0.0 0.02);
+ // radius at p1
+ radius1 0.03;
+ // radius at p2
+ radius2 0.03;
+ // number of divisions
+ resolution 36;
+ // material name of this wall
+ material prop1;
+ // motion component name
+ motion rotAxis;
+ }
+ exitGate
+ {
+ type planeWall;
+ p1 (-0.05 -0.05 0);
+ p2 (-0.05 0.05 0);
+ p3 ( 0.05 0.05 0);
+ p4 (0.05 -0.05 0);
+ material prop1;
+ motion rotAxis;
+ }
+
+}
+// information for rotatingAxisMotion motion model
+rotatingAxisMotionInfo
+{
+ rotAxis
+ {
+ p1 (-0.1 0.0 0.15); // first point for the axis of rotation
+ p2 (0.1 0.0 0.15); // second point for the axis of rotation
+ omega 3; // rotation speed (rad/s)
+ }
+}
diff --git a/tutorials/sphereGranFlow/toteBlender/settings/particlesDict b/tutorials/sphereGranFlow/toteBlender/settings/particlesDict
new file mode 100644
index 00000000..49a26e76
--- /dev/null
+++ b/tutorials/sphereGranFlow/toteBlender/settings/particlesDict
@@ -0,0 +1,59 @@
+/* -------------------------------*- C++ -*--------------------------------- *\
+| phasicFlow File |
+| copyright: www.cemf.ir |
+\* ------------------------------------------------------------------------- */
+objectName particlesDict;
+objectType dictionary;
+/* ------------------------------------------------------------------------- */
+setFields
+{
+ /*
+ Default value for fields defined for particles
+ These fields should always be defined for simulations with
+ spherical particles.
+ */
+
+ defaultValue
+ {
+// linear velocity (m/s)
+ velocity realx3 (0 0 0);
+// linear acceleration (m/s2)
+ acceleration realx3 (0 0 0);
+// rotational velocity (rad/s)
+ rotVelocity realx3 (0 0 0);
+// name of the particle shape
+ shapeName word sphere1;
+ }
+
+ selectors
+ {}
+}
+
+// positions particles
+positionParticles
+{
+// ordered positioning
+ method positionOrdered;
+// maximum number of particles in the simulation
+ maxNumberOfParticles 40000;
+// perform initial sorting based on morton code?
+ mortonSorting Yes;
+// box for positioning particles
+ box
+ {
+// lower corner point of the box
+ min (-0.06 -0.06 0.08);
+// upper corner point of the box
+ max (0.06 0.06 0.18);
+ }
+
+ positionOrderedInfo
+ {
+// minimum space between centers of particles
+ diameter 0.004;
+// number of particles in the simulation
+ numPoints 20000;
+// axis order for filling the space with particles
+ axisOrder (z y x);
+ }
+}
diff --git a/tutorials/sphereGranFlow/toteBlender/settings/settingsDict b/tutorials/sphereGranFlow/toteBlender/settings/settingsDict
new file mode 100644
index 00000000..28b9a552
--- /dev/null
+++ b/tutorials/sphereGranFlow/toteBlender/settings/settingsDict
@@ -0,0 +1,34 @@
+/* -------------------------------*- C++ -*--------------------------------- *\
+| phasicFlow File |
+| copyright: www.cemf.ir |
+\* ------------------------------------------------------------------------- */
+objectName settingsDict;
+objectType dictionary;;
+/*---------------------------------------------------------------------------*/
+run toteBlender;
+// time step for integration (s)
+dt 0.00001;
+// start time for simulation
+startTime 0;
+// end time for simulation
+endTime 10;
+// time interval for saving the simulation
+saveInterval 0.1;
+// maximum number of digits for time folder
+timePrecision 6;
+// gravity vector (m/s2)
+g (0 0 -9.8);
+
+/* Simulation domain */
+/* every particles that goes outside this domain is deleted. */
+domain
+{
+ min (-0.5 -0.5 -0.5);
+ max (0.5 0.5 0.5);
+}
+// integration method
+integrationMethod AdamsBashforth2;
+// report timers?
+timersReport Yes;
+// time interval for reporting timers
+timersReportInterval 0.01;