documentation for v1.0

Auto-complete for command line

.gitignore

@@ -1,6 +1,12 @@
+# files 
+.clang-format
+.vscode
+.dependencygraph
+
 # Prerequisites
 *.d
 
+
 # Compiled Object files
 *.slo
 *.lo

CMakeLists.txt

@@ -1,75 +1,73 @@
 cmake_minimum_required(VERSION 3.16 FATAL_ERROR)
 
 # set the project name and version
-project(phasicFlow VERSION 0.1 )
+project(phasicFlow VERSION 1.0 )
 
 set(CMAKE_CXX_STANDARD 17 CACHE STRING "" FORCE)
 set(CMAKE_CXX_STANDARD_REQUIRED True)
 set(CMAKE_INSTALL_PREFIX ${phasicFlow_SOURCE_DIR} CACHE PATH "Install path of phasicFlow" FORCE)
-set(CMAKE_BUILD_TYPE Release CACHE STRING "build type" FORCE)
+set(CMAKE_BUILD_TYPE Debug CACHE STRING "build type" FORCE)
+set(BUILD_SHARED_LIBS ON CACHE BOOL "Build using shared libraries" FORCE)
+mark_as_advanced(FORCE var BUILD_SHARED_LIBS)
 
 message(STATUS ${CMAKE_INSTALL_PREFIX})
 
-mark_as_advanced(FORCE var Kokkos_ENABLE_CUDA_LAMBDA)
-mark_as_advanced(FORCE var Kokkos_ENABLE_OPENMP)
-mark_as_advanced(FORCE var Kokkos_ENABLE_SERIAL)
-mark_as_advanced(FORCE var Kokkos_ENABLE_CUDA_LAMBDA)
-mark_as_advanced(FORCE var BUILD_SHARED_LIBS)
+include(cmake/globals.cmake)
 
-option(USE_STD_PARALLEL_ALG "Use TTB std parallel algorithms" ON)
+#Kokkos directory to be included 
+set(Kokkos_Source_DIR)
+
+if(DEFINED ENV{Kokkos_DIR})
+   set(Kokkos_Source_DIR $ENV{Kokkos_DIR})
+else()
+  set(Kokkos_Source_DIR $ENV{HOME}/Kokkos/kokkos)
+endif()
+message(STATUS "Kokkos source directory is ${Kokkos_Source_DIR}")
+add_subdirectory(${Kokkos_Source_DIR} ./kokkos)
+Kokkos_cmake_settings()
+
+
+option(pFlow_STD_Parallel_Alg "Use TTB std parallel algorithms" ON)
 option(pFlow_Build_Serial "Build phasicFlow and backends for serial execution" OFF)
 option(pFlow_Build_OpenMP "Build phasicFlow and backends for OpenMP execution" OFF)
 option(pFlow_Build_Cuda   "Build phasicFlow and backends for Cuda execution" OFF)
-option(pFlow_Build_Double "Build phasicFlow with double precision variables" ON)
+option(pFlow_Build_Double "Build phasicFlow with double precision floating-oint variables" ON)
+option(pFlow_Build_MPI    "Build for MPI parallelization. This will enable multi-gpu run, CPU run on clusters (distributed memory machine). Use this combination Cuda+MPI, OpenMP + MPI or Serial+MPI " OFF)
 
-set(BUILD_SHARED_LIBS ON CACHE BOOL "Build using shared libraries" FORCE)
 
 if(pFlow_Build_Serial)
 	set(Kokkos_ENABLE_SERIAL ON CACHE BOOL "Serial execution" FORCE) 
 	set(Kokkos_ENABLE_OPENMP OFF CACHE BOOL "OpenMP execution" FORCE)
 	set(Kokkos_ENABLE_CUDA OFF CACHE BOOL "Cuda execution" FORCE)
 	set(Kokkos_ENABLE_CUDA_LAMBDA OFF CACHE BOOL "Cuda execution" FORCE)
+	set(Kokkos_ENABLE_CUDA_CONSTEXPR OFF CACHE BOOL "Enable constexpr on cuda code" FORCE)
 elseif(pFlow_Build_OpenMP )
 	set(Kokkos_ENABLE_SERIAL ON CACHE BOOL "Serial execution" FORCE) 
 	set(Kokkos_ENABLE_OPENMP ON CACHE BOOL "OpenMP execution" FORCE)
 	set(Kokkos_ENABLE_CUDA OFF CACHE BOOL "Cuda execution" FORCE)
 	set(Kokkos_ENABLE_CUDA_LAMBDA OFF CACHE BOOL "Cuda execution" FORCE)
 	set(Kokkos_DEFAULT_HOST_PARALLEL_EXECUTION_SPACE SERIAL CACHE STRING "" FORCE)
+	set(Kokkos_ENABLE_CUDA_CONSTEXPR OFF CACHE BOOL "Enable constexpr on cuda code" FORCE)
 elseif(pFlow_Build_Cuda)
 	set(Kokkos_ENABLE_SERIAL ON CACHE BOOL "Serial execution" FORCE) 
 	set(Kokkos_ENABLE_OPENMP OFF CACHE BOOL "OpenMP execution" FORCE)
 	set(Kokkos_ENABLE_CUDA ON CACHE BOOL "Cuda execution" FORCE)
 	set(Kokkos_ENABLE_CUDA_LAMBDA ON CACHE BOOL "Cuda execution" FORCE)
+	set(Kokkos_ENABLE_CUDA_CONSTEXPR ON CACHE BOOL "Enable constexpr on cuda code" FORCE)
 endif()
 
-
-
-include(cmake/globals.cmake)
-message(STATUS "Valid file extensions are ${validFiles}")
+if(pFlow_Build_MPI)
+	find_package(MPI REQUIRED)
+endif()
 
 include(cmake/makeLibraryGlobals.cmake)
 include(cmake/makeExecutableGlobals.cmake)
 
 configure_file(phasicFlowConfig.H.in phasicFlowConfig.H)
-
+set(CMAKE_EXPORT_COMPILE_COMMANDS ON)
 #add a global include directory 
 include_directories(src/setHelpers src/demComponent "${PROJECT_BINARY_DIR}")
 
-#main subdirectories of the code 
-set(Kokkos_Source_DIR)
-
-if(DEFINED ENV{Kokkos_DIR})
-   set(Kokkos_Source_DIR $ENV{Kokkos_DIR})
-#  add_subdirectory($ENV{Kokkos_DIR} ${phasicFlow_BINARY_DIR}/kokkos)
-#  message(STATUS "Kokkos directory is $ENV{Kokkos_DIR}")
-else()
-#  add_subdirectory($ENV{HOME}/Kokkos/kokkos ${phasicFlow_BINARY_DIR}/kokkos)
-  set(Kokkos_Source_DIR $ENV{HOME}/Kokkos/kokkos)
-endif()
-
-message(STATUS "Kokkos source directory is ${Kokkos_Source_DIR}")
-add_subdirectory(${Kokkos_Source_DIR} ${phasicFlow_BINARY_DIR}/kokkos)
-
 add_subdirectory(src)
 
 add_subdirectory(solvers)
@@ -77,12 +75,9 @@ add_subdirectory(solvers)
 add_subdirectory(utilities)
 
 add_subdirectory(DEMSystems)
-#add_subdirectory(testIO)
-
 
 install(FILES "${PROJECT_BINARY_DIR}/phasicFlowConfig.H"
-  DESTINATION include
-)
+  DESTINATION include)
 
 include(InstallRequiredSystemLibraries)
 set(CPACK_RESOURCE_FILE_LICENSE "${CMAKE_CURRENT_SOURCE_DIR}/LICENSE")

DEMSystems/CMakeLists.txt

@@ -1,9 +1,11 @@
 
 set(SourceFiles 
-DEMSystem/DEMSystem.cpp
-sphereDEMSystem/sphereDEMSystem.cpp
-sphereDEMSystem/sphereFluidParticles.cpp
 domainDistribute/domainDistribute.cpp
+DEMSystem/DEMSystem.cpp
+sphereDEMSystem/sphereFluidParticles.cpp
+sphereDEMSystem/sphereDEMSystem.cpp
+grainDEMSystem/grainFluidParticles.cpp
+grainDEMSystem/grainDEMSystem.cpp
 )
 
 set(link_libs Kokkos::kokkos phasicFlow Particles Geometry Property Interaction Interaction Utilities)

DEMSystems/DEMSystem/DEMSystem.cpp

@@ -34,13 +34,13 @@ pFlow::DEMSystem::DEMSystem(
 {
   
 	REPORT(0)<<"Initializing host/device execution spaces . . . \n";
-	REPORT(1)<<"Host execution space is "<< greenText(DefaultHostExecutionSpace::name())<<endREPORT;
-	REPORT(1)<<"Device execution space is "<<greenText(DefaultExecutionSpace::name())<<endREPORT;
+	REPORT(1)<<"Host execution space is "<< Green_Text(DefaultHostExecutionSpace::name())<<END_REPORT;
+	REPORT(1)<<"Device execution space is "<<Green_Text(DefaultExecutionSpace::name())<<END_REPORT;
 
  	// initialize Kokkos
 	Kokkos::initialize( argc, argv ); 
 
-	REPORT(0)<<"\nCreating Control repository . . ."<<endREPORT;
+	REPORT(0)<<"\nCreating Control repository . . ."<<END_REPORT;
 	Control_ = makeUnique<systemControl>(
 		ControlDict_.startTime(),
 		ControlDict_.endTime(),
@@ -87,4 +87,3 @@ pFlow::uniquePtr<pFlow::DEMSystem>
 
 	return nullptr;
 }
-

DEMSystems/DEMSystem/DEMSystem.hpp

@@ -25,6 +25,7 @@ Licence:
 
 #include "types.hpp"
 #include "span.hpp"
+#include "box.hpp"
 #include "virtualConstructor.hpp"
 #include "uniquePtr.hpp"
 #include "systemControl.hpp"
@@ -60,6 +61,7 @@ public:
 
 	DEMSystem(const DEMSystem&)=delete;
 
+	/// @brief no assignment 
 	DEMSystem& operator = (const DEMSystem&)=delete;
 
 	create_vCtor(
@@ -111,19 +113,34 @@ public:
 	int32 numParInDomain(int32 di)const = 0;
 	
 	virtual
-	std::vector<int32> numParInDomain()const = 0;
+	std::vector<int32> numParInDomains()const = 0;
 
 	virtual 
-	span<const int32> parIndexInDomain(int32 di)const = 0;
+	span<const int32> parIndexInDomain(int32 domIndx)const = 0;
 
 	virtual
-	span<real> parDiameter() = 0; 
+	span<real> diameter() = 0; 
 
 	virtual 
-	span<realx3> parVelocity() = 0;
+	span<real> courseGrainFactor() = 0;
 
 	virtual
-	span<realx3> parPosition() = 0;
+	span<realx3> acceleration()=0;
+
+	virtual
+	span<realx3> velocity() = 0;
+
+	virtual
+	span<realx3> position() = 0;
+
+	virtual
+	span<realx3> rAcceleration()=0;
+
+	virtual
+	span<realx3> rVelocity() = 0;
+
+	virtual
+	span<realx3> rPosition() = 0;
 
 	virtual
 	span<realx3> parFluidForce() = 0;
@@ -153,7 +170,6 @@ public:
 	bool iterate(real upToTime) = 0;
 	
 	
-
 	static 
 	uniquePtr<DEMSystem>
 		create(
@@ -162,8 +178,6 @@ public:
 			int argc, 
 			char* argv[]);
 
-
-
 };
 
 

DEMSystems/domainDistribute/domainDistribute.cpp

@@ -33,7 +33,7 @@ void pFlow::domainDistribute::clcDomains(const std::vector<box>& domains)
 
 
 pFlow::domainDistribute::domainDistribute(
-	const Vector<box>& domains,
+	const std::vector<box>& domains,
 	real maxBoundingBox)
 :
 numDomains_(domains.size()),
@@ -47,10 +47,10 @@ maxBoundingBoxSize_(maxBoundingBox)
 }
 
 bool pFlow::domainDistribute::locateParticles(
-		ViewType1D<realx3,HostSpace> points, includeMask mask)
+		ViewType1D<realx3,HostSpace> points, const pFlagTypeHost& mask)
 {
 	
-	range activeRange = mask.activeRange();
+	const rangeU32 activeRange = mask.activeRange();
 
 
 	for(int32 di=0; di<numDomains_; di++)
@@ -59,7 +59,7 @@ bool pFlow::domainDistribute::locateParticles(
 	}
 
 	
-	for(int32 i=activeRange.first; i<activeRange.second; i++)
+	for(int32 i=activeRange.start(); i<activeRange.end(); i++)
 	{
 		if(mask(i))
 		{

DEMSystems/domainDistribute/domainDistribute.hpp

@@ -43,19 +43,16 @@ protected:
 	
 	int32Vector_H 							numParInDomain_;
 
-
 	real maxBoundingBoxSize_;
 
 	real domainExtension_ = 1.0;
 
-	using includeMask = typename pointStructure::activePointsHost;
-
 	void clcDomains(const std::vector<box>& domains);
 
 public:
 
 	domainDistribute(
-		const Vector<box>& domains,
+		const std::vector<box>& domains,
 		real maxBoundingBox);
 
 	~domainDistribute()=default;
@@ -78,7 +75,7 @@ public:
 	{
 		return
 		span<const int32>(
-			particlesInDomains_[di].hostVectorAll().data(),
+			particlesInDomains_[di].hostViewAll().data(),
 			numParInDomain_[di]
 			);
 	}
@@ -91,7 +88,7 @@ public:
 
 	//template<typename includeMask>
 	bool locateParticles(
-		ViewType1D<realx3,HostSpace> points, includeMask mask);
+		ViewType1D<realx3,HostSpace> points, const pFlagTypeHost& mask);
 	
 };
 

DEMSystems/grainDEMSystem/grainDEMSystem.cpp

@@ -0,0 +1,268 @@
+/*------------------------------- phasicFlow ---------------------------------
+      O        C enter of
+     O O       E ngineering and
+    O   O      M ultiscale modeling of
+   OOOOOOO     F luid flow       
+------------------------------------------------------------------------------
+  Copyright (C): www.cemf.ir
+  email: hamid.r.norouzi AT gmail.com
+------------------------------------------------------------------------------  
+Licence:
+  This file is part of phasicFlow code. It is a free software for simulating 
+  granular and multiphase flows. You can redistribute it and/or modify it under
+  the terms of GNU General Public License v3 or any other later versions. 
+ 
+  phasicFlow is distributed to help others in their research in the field of 
+  granular and multiphase flows, but WITHOUT ANY WARRANTY; without even the
+  implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
+
+-----------------------------------------------------------------------------*/
+
+#include "grainDEMSystem.hpp"
+#include "vocabs.hpp"
+
+bool pFlow::grainDEMSystem::loop()
+{
+
+	do 
+	{
+		//
+		if(! insertion_().insertParticles( 
+			Control().time().currentIter(),
+			Control().time().currentTime(),
+			Control().time().dt()	) )
+		{
+			fatalError<<
+			"particle insertion failed in grainDEMSystem.\n";
+			return false;
+		}	
+
+		geometry_->beforeIteration();
+		
+		interaction_->beforeIteration();
+
+		particles_->beforeIteration();
+		
+		
+		interaction_->iterate();
+
+		particles_->iterate();
+
+		geometry_->iterate();
+
+		particles_->afterIteration();
+		
+		geometry_->afterIteration();
+
+	}while(Control()++);
+
+	return true;
+}
+
+pFlow::grainDEMSystem::grainDEMSystem(
+		word  demSystemName,
+		const std::vector<box>& domains,
+		int argc, 
+		char* argv[],
+		bool requireRVel)
+:
+	DEMSystem(demSystemName, domains, argc, argv),
+	requireRVel_(requireRVel)
+{ 
+	
+	REPORT(0)<<"\nReading proprties . . . "<<END_REPORT;
+	property_ = makeUnique<property>(
+		propertyFile__,
+    	Control().caseSetup().path());
+
+	REPORT(0)<< "\nCreating surface geometry for grainDEMSystem . . . "<<END_REPORT;
+	geometry_ = geometry::create(Control(), Property());
+
+
+	REPORT(0)<<"\nReading grain particles . . ."<<END_REPORT;
+	particles_ = makeUnique<grainFluidParticles>(Control(), Property());
+
+
+	insertion_ = makeUnique<grainInsertion>( 
+		particles_(), 
+		particles_().grains());
+	
+	REPORT(0)<<"\nCreating interaction model for grain-grain contact and grain-wall contact . . ."<<END_REPORT;
+	interaction_ = interaction::create(
+		Control(),
+		Particles(),
+		Geometry());
+
+	auto maxD = maxBounndingSphereSize();
+
+	particleDistribution_ = makeUnique<domainDistribute>(domains, maxD);
+
+}
+
+
+pFlow::grainDEMSystem::~grainDEMSystem()
+{
+	
+}
+
+bool pFlow::grainDEMSystem::updateParticleDistribution(
+	real extentFraction,
+	const std::vector<box> domains)
+{
+
+	if(!particleDistribution_->changeDomainsSize(
+		extentFraction,
+		maxBounndingSphereSize(),
+		domains))
+	{
+		fatalErrorInFunction<<
+		"cannot change the domain size"<<endl;
+		return false;
+	}
+
+	if(!particleDistribution_->locateParticles(
+			positionHost_, 
+			particles_->pStruct().activePointsMaskHost()))
+	{
+		fatalErrorInFunction<<
+		"error in locating particles among sub-domains"<<endl;
+		return false;
+	}
+
+	return true;
+}
+
+pFlow::int32 
+	pFlow::grainDEMSystem::numParInDomain(int32 di)const
+{
+	return particleDistribution_().numParInDomain(di);
+}
+
+std::vector<pFlow::int32> 
+	pFlow::grainDEMSystem::numParInDomains()const
+{
+	const auto& distribute = particleDistribution_();
+	int32 numDomains = distribute.numDomains();
+	std::vector<int32> nums(numDomains);
+	for(int32 i=0; i<numDomains; i++)
+	{
+		nums[i] = distribute.numParInDomain(i);
+	}
+
+	return nums;
+}
+
+pFlow::span<const pFlow::int32> 
+pFlow::grainDEMSystem::parIndexInDomain(int32 di)const
+{
+	return particleDistribution_->particlesInDomain(di);
+}
+
+pFlow::span<pFlow::real> pFlow::grainDEMSystem::diameter() 
+{	
+	return span<real>(diameterHost_.data(), diameterHost_.size());
+}
+
+pFlow::span<pFlow::real> pFlow::grainDEMSystem::courseGrainFactor()
+{
+    return span<real>(particles_->courseGrainFactorHost().data(), particles_->courseGrainFactorHost().size());
+}
+
+pFlow::span<pFlow::realx3> pFlow::grainDEMSystem::acceleration()
+{
+    return span<realx3>(nullptr, 0);
+}
+
+pFlow::span<pFlow::realx3> pFlow::grainDEMSystem::velocity()  
+{
+	return span<realx3>(velocityHost_.data(), velocityHost_.size());
+}
+
+pFlow::span<pFlow::realx3> pFlow::grainDEMSystem::position()  
+{
+	return span<realx3>(positionHost_.data(), positionHost_.size());
+}
+
+pFlow::span<pFlow::realx3> pFlow::grainDEMSystem::rAcceleration()
+{
+    return span<realx3>(nullptr, 0);
+}
+
+pFlow::span<pFlow::realx3> pFlow::grainDEMSystem::rVelocity()
+{
+    return span<realx3>(rVelocityHost_.data(), rVelocityHost_.size());
+}
+
+pFlow::span<pFlow::realx3> pFlow::grainDEMSystem::rPosition()
+{
+    return span<realx3>(nullptr, 0);
+}
+
+pFlow::span<pFlow::realx3> pFlow::grainDEMSystem::parFluidForce() 
+{
+	auto& hVec =  particles_->fluidForceHost();
+	
+	return span<realx3>(hVec.data(), hVec.size());
+}
+
+pFlow::span<pFlow::realx3> pFlow::grainDEMSystem::parFluidTorque() 
+{
+	auto& hVec =  particles_->fluidTorqueHost();
+	return span<realx3>(hVec.data(), hVec.size());
+}
+
+bool pFlow::grainDEMSystem::sendFluidForceToDEM() 
+{
+	particles_->fluidForceHostUpdatedSync();
+	return true;
+}
+
+bool pFlow::grainDEMSystem::sendFluidTorqueToDEM()
+{
+	particles_->fluidTorqueHostUpdatedSync();
+	return true;
+}
+
+bool pFlow::grainDEMSystem::beforeIteration()
+{
+	velocityHost_ = std::as_const(particles_()).velocity().hostView();
+	positionHost_ = std::as_const(particles_()).pointPosition().hostView();
+	diameterHost_ = particles_->diameter().hostView();
+
+	if(requireRVel_)
+		rVelocityHost_ = std::as_const(particles_()).rVelocity().hostView();
+	
+
+	return true;
+}
+
+
+bool pFlow::grainDEMSystem::iterate(
+	real upToTime, 
+	real timeToWrite, 
+	word timeName) 
+{
+
+	Control().time().setStopAt(upToTime);
+	Control().time().setOutputToFile(timeToWrite, timeName);
+	
+	return loop();
+
+	return true;
+}
+
+bool pFlow::grainDEMSystem::iterate(real upToTime)
+{
+	Control().time().setStopAt(upToTime);
+	return loop();
+	return true;
+}
+
+pFlow::real 
+	pFlow::grainDEMSystem::maxBounndingSphereSize()const
+{
+	real minD, maxD;
+	particles_->boundingSphereMinMax(minD, maxD);
+
+	return maxD;
+}

DEMSystems/grainDEMSystem/grainDEMSystem.hpp

@@ -0,0 +1,163 @@
+/*------------------------------- phasicFlow ---------------------------------
+      O        C enter of
+     O O       E ngineering and
+    O   O      M ultiscale modeling of
+   OOOOOOO     F luid flow       
+------------------------------------------------------------------------------
+  Copyright (C): www.cemf.ir
+  email: hamid.r.norouzi AT gmail.com
+------------------------------------------------------------------------------  
+Licence:
+  This file is part of phasicFlow code. It is a free software for simulating 
+  granular and multiphase flows. You can redistribute it and/or modify it under
+  the terms of GNU General Public License v3 or any other later versions. 
+ 
+  phasicFlow is distributed to help others in their research in the field of 
+  granular and multiphase flows, but WITHOUT ANY WARRANTY; without even the
+  implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
+
+-----------------------------------------------------------------------------*/
+
+#ifndef __grainDEMSystem_hpp__
+#define __grainDEMSystem_hpp__
+
+#include "DEMSystem.hpp"
+#include "property.hpp"
+#include "uniquePtr.hpp"
+#include "geometry.hpp"
+#include "grainFluidParticles.hpp"
+#include "interaction.hpp"
+#include "Insertions.hpp"
+#include "domainDistribute.hpp"
+
+
+namespace pFlow
+{
+
+class grainDEMSystem
+:
+	public DEMSystem
+{
+protected:
+	
+	// protected members 
+
+	uniquePtr<property> 			property_ = nullptr;
+
+	uniquePtr<geometry> 			geometry_ = nullptr;
+
+	uniquePtr<grainFluidParticles>  particles_ = nullptr;
+
+	uniquePtr<grainInsertion> 		insertion_ = nullptr;
+
+	uniquePtr<interaction> 			interaction_ = nullptr;
+
+	uniquePtr<domainDistribute> 	particleDistribution_=nullptr;
+
+	// to be used for CPU communications 
+	ViewType1D<realx3, HostSpace> 	velocityHost_;
+
+	ViewType1D<realx3, HostSpace> 	positionHost_;
+
+	ViewType1D<real, HostSpace> 	diameterHost_;
+
+	bool 							requireRVel_ = false;
+
+	ViewType1D<realx3, HostSpace> 	rVelocityHost_;
+
+
+//  protected member functions
+	auto& Property()
+	{
+		return property_();
+	}
+
+	auto& Geometry()
+	{
+		return geometry_();
+	}
+
+	auto& Particles()
+	{
+		return particles_();
+	}
+
+	auto& Interaction()
+	{
+		return interaction_();
+	} 
+
+	bool loop();
+
+public:
+
+	TypeInfo("grainDEMSystem");
+
+	grainDEMSystem(
+		word  demSystemName,
+		const std::vector<box>& domains,
+		int argc, 
+		char* argv[],
+		bool requireRVel=false);
+
+	virtual ~grainDEMSystem();
+
+	grainDEMSystem(const grainDEMSystem&)=delete;
+
+	grainDEMSystem& operator = (const grainDEMSystem&)=delete;
+
+	add_vCtor(
+		DEMSystem,
+		grainDEMSystem,
+		word);
+
+
+	bool updateParticleDistribution(real extentFraction, const std::vector<box> domains) override;
+	 
+	int32 numParInDomain(int32 di)const override;
+	
+	std::vector<int32> numParInDomains()const override;
+
+	span<const int32> parIndexInDomain(int32 di)const override;
+
+	span<real> diameter() override;
+
+	span<real> courseGrainFactor() override;
+
+	span<realx3> acceleration() override;
+
+	span<realx3> velocity() override;
+
+	span<realx3> position() override;
+
+	span<realx3> rAcceleration() override;
+
+	span<realx3> rVelocity() override;
+
+	span<realx3> rPosition() override;
+
+	span<realx3> parFluidForce() override;
+
+	span<realx3> parFluidTorque() override;
+
+	bool sendFluidForceToDEM() override;
+
+	bool sendFluidTorqueToDEM() override;
+
+	bool beforeIteration() override;
+
+	bool iterate(
+		real upToTime, 
+		real timeToWrite, 
+		word timeName) override;
+
+	bool iterate(real upToTime) override;
+	
+	real maxBounndingSphereSize()const override;
+
+};
+
+
+} // pFlow
+
+#endif

DEMSystems/grainDEMSystem/grainFluidParticles.cpp

@@ -0,0 +1,107 @@
+/*------------------------------- phasicFlow ---------------------------------
+      O        C enter of
+     O O       E ngineering and
+    O   O      M ultiscale modeling of
+   OOOOOOO     F luid flow       
+------------------------------------------------------------------------------
+  Copyright (C): www.cemf.ir
+  email: hamid.r.norouzi AT gmail.com
+------------------------------------------------------------------------------  
+Licence:
+  This file is part of phasicFlow code. It is a free software for simulating 
+  granular and multiphase flows. You can redistribute it and/or modify it under
+  the terms of GNU General Public License v3 or any other later versions. 
+ 
+  phasicFlow is distributed to help others in their research in the field of 
+  granular and multiphase flows, but WITHOUT ANY WARRANTY; without even the
+  implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
+
+-----------------------------------------------------------------------------*/
+
+#include "grainFluidParticles.hpp"
+#include "grainFluidParticlesKernels.hpp"
+
+void pFlow::grainFluidParticles::checkHostMemory()
+{
+	if(fluidForce_.size()!=fluidForceHost_.size())
+	{
+		resizeNoInit(fluidForceHost_, fluidForce_.size());
+		resizeNoInit(fluidTorqueHost_, fluidTorque_.size());
+	}
+
+	// copy the data (if required) from device to host
+	courseGrainFactorHost_ = coarseGrainFactor().hostView();
+}
+
+pFlow::grainFluidParticles::grainFluidParticles(
+    systemControl &control,
+    const property &prop)
+    : grainParticles(control, prop),
+      fluidForce_(
+          objectFile(
+              "fluidForce",
+              "",
+              objectFile::READ_IF_PRESENT,
+              objectFile::WRITE_ALWAYS),
+          dynPointStruct(),
+          zero3),
+      fluidTorque_(
+          objectFile(
+              "fluidTorque",
+              "",
+              objectFile::READ_IF_PRESENT,
+              objectFile::WRITE_NEVER),
+          dynPointStruct(),
+          zero3)
+{
+	checkHostMemory();
+} 
+
+bool pFlow::grainFluidParticles::beforeIteration()
+{
+	grainParticles::beforeIteration();
+	checkHostMemory();
+	return true;
+}
+
+
+bool pFlow::grainFluidParticles::iterate() 
+{
+
+	accelerationTimer().start();
+		pFlow::grainFluidParticlesKernels::acceleration(
+			control().g(),
+			mass().deviceViewAll(),
+			contactForce().deviceViewAll(),
+			fluidForce_.deviceViewAll(),
+			I().deviceViewAll(),
+			contactTorque().deviceViewAll(),
+			fluidTorque_.deviceViewAll(),
+			pStruct().activePointsMaskDevice(),
+			accelertion().deviceViewAll(),
+			rAcceleration().deviceViewAll()
+			);
+	accelerationTimer().end();
+	
+	intCorrectTimer().start();
+	
+		dynPointStruct().correct(this->dt(), accelertion());
+	
+		rVelIntegration().correct(this->dt(), rVelocity(), rAcceleration());
+	
+	intCorrectTimer().end();
+	
+	return true;
+}
+
+void pFlow::grainFluidParticles::fluidForceHostUpdatedSync()
+{
+	copy(fluidForce_.deviceView(), fluidForceHost_);
+	return;
+}
+
+void pFlow::grainFluidParticles::fluidTorqueHostUpdatedSync()
+{
+	copy(fluidTorque_.deviceView(), fluidTorqueHost_);
+	return;
+}

DEMSystems/grainDEMSystem/grainFluidParticles.hpp

@@ -0,0 +1,105 @@
+/*------------------------------- phasicFlow ---------------------------------
+      O        C enter of
+     O O       E ngineering and
+    O   O      M ultiscale modeling of
+   OOOOOOO     F luid flow       
+------------------------------------------------------------------------------
+  Copyright (C): www.cemf.ir
+  email: hamid.r.norouzi AT gmail.com
+------------------------------------------------------------------------------  
+Licence:
+  This file is part of phasicFlow code. It is a free software for simulating 
+  granular and multiphase flows. You can redistribute it and/or modify it under
+  the terms of GNU General Public License v3 or any other later versions. 
+ 
+  phasicFlow is distributed to help others in their research in the field of 
+  granular and multiphase flows, but WITHOUT ANY WARRANTY; without even the
+  implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
+
+-----------------------------------------------------------------------------*/
+
+/*! 
+   @class pFlow::grainFluidParticles
+    
+   @brief Class for managing grain particles with fluid interactions 
+   
+   This is a top-level class that contains the essential components for
+   defining grain prticles with fluid interactions in a DEM simulation.
+ */
+
+#ifndef __grainFluidParticles_hpp__
+#define __grainFluidParticles_hpp__ 
+
+#include "grainParticles.hpp"
+
+
+namespace pFlow
+{
+
+class grainFluidParticles
+:
+	public grainParticles 
+{
+protected:
+	
+	/// pointField of rotational acceleration of particles on device  
+	realx3PointField_D 		fluidForce_;
+
+	hostViewType1D<realx3> 	fluidForceHost_;
+
+	realx3PointField_D 		fluidTorque_;
+
+	hostViewType1D<realx3>	fluidTorqueHost_;
+
+	hostViewType1D<real> 	courseGrainFactorHost_;
+
+
+	void checkHostMemory();
+
+public:
+
+	/// construct from systemControl and property 
+	grainFluidParticles(systemControl &control, const property& prop);
+
+	~grainFluidParticles() override = default;
+	
+	/// before iteration step 
+	bool beforeIteration() override;
+	
+	/// iterate particles 
+	bool iterate() override;	
+
+	auto& fluidForce()
+	{
+		return fluidForce_;
+	}
+
+	auto& fluidTorque()
+	{
+		return fluidTorque_;
+	}
+
+	auto& fluidForceHost()
+	{
+		return fluidForceHost_; 
+	}
+
+	auto& fluidTorqueHost()
+	{
+		return fluidTorqueHost_;
+	}
+
+	auto& courseGrainFactorHost()
+	{
+		return courseGrainFactorHost_;
+	}
+
+	void fluidForceHostUpdatedSync();
+
+	void fluidTorqueHostUpdatedSync();
+	
+}; //grainFluidParticles
+
+} // pFlow
+
+#endif //__sphereFluidParticles_hpp__

DEMSystems/grainDEMSystem/grainFluidParticlesKernels.hpp

@@ -0,0 +1,79 @@
+/*------------------------------- phasicFlow ---------------------------------
+      O        C enter of
+     O O       E ngineering and
+    O   O      M ultiscale modeling of
+   OOOOOOO     F luid flow       
+------------------------------------------------------------------------------
+  Copyright (C): www.cemf.ir
+  email: hamid.r.norouzi AT gmail.com
+------------------------------------------------------------------------------  
+Licence:
+  This file is part of phasicFlow code. It is a free software for simulating 
+  granular and multiphase flows. You can redistribute it and/or modify it under
+  the terms of GNU General Public License v3 or any other later versions. 
+ 
+  phasicFlow is distributed to help others in their research in the field of 
+  granular and multiphase flows, but WITHOUT ANY WARRANTY; without even the
+  implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
+
+-----------------------------------------------------------------------------*/
+
+#ifndef __grainFluidParticlesKernels_hpp__
+#define __grainFluidParticlesKernels_hpp__
+
+namespace pFlow::grainFluidParticlesKernels
+{
+
+using rpAcceleration = Kokkos::RangePolicy<
+			DefaultExecutionSpace,
+			Kokkos::Schedule<Kokkos::Static>,
+			Kokkos::IndexType<int32>
+			>;
+
+template<typename IncludeFunctionType>
+void acceleration( 
+	realx3		g,
+	deviceViewType1D<real>  	mass,
+	deviceViewType1D<realx3>  	force,
+	deviceViewType1D<realx3>  	fluidForce,
+	deviceViewType1D<real>  	I,
+	deviceViewType1D<realx3>  	torque,
+	deviceViewType1D<realx3>  	fluidTorque,
+	IncludeFunctionType 		incld,
+	deviceViewType1D<realx3> 	lAcc,
+	deviceViewType1D<realx3> 	rAcc
+	)
+{
+
+	auto activeRange = incld.activeRange();
+	if(incld.isAllActive())
+	{
+		Kokkos::parallel_for(
+		"pFlow::grainParticlesKernels::acceleration",
+		rpAcceleration(activeRange.first, activeRange.second),
+		LAMBDA_HD(int32 i){
+				lAcc[i] = (force[i]+fluidForce[i])/mass[i] + g;
+				rAcc[i] = (torque[i]+fluidTorque[i])/I[i];
+		});
+	}
+	else
+	{
+		Kokkos::parallel_for(
+		"pFlow::grainParticlesKernels::acceleration",
+		rpAcceleration(activeRange.first, activeRange.second),
+		LAMBDA_HD(int32 i){
+			if(incld(i))
+			{
+				lAcc[i] = (force[i]+fluidForce[i])/mass[i] + g;
+				rAcc[i] = (torque[i]+fluidTorque[i])/I[i];
+			}
+		});
+
+	}
+	
+	Kokkos::fence();
+}
+
+}
+
+#endif 

DEMSystems/sphereDEMSystem/sphereDEMSystem.cpp

@@ -19,6 +19,7 @@ Licence:
 -----------------------------------------------------------------------------*/
 
 #include "sphereDEMSystem.hpp"
+#include "vocabs.hpp"
 
 bool pFlow::sphereDEMSystem::loop()
 {
@@ -26,17 +27,16 @@ bool pFlow::sphereDEMSystem::loop()
 	do 
 	{
 		//
-		
 		if(! insertion_().insertParticles( 
+			Control().time().currentIter(),
 			Control().time().currentTime(),
 			Control().time().dt()	) )
 		{
 			fatalError<<
-			"particle insertion failed in sphereDFlow solver.\n";
+			"particle insertion failed in sphereDEMSystem.\n";
 			return false;
 		}	
 
-
 		geometry_->beforeIteration();
 		
 		interaction_->beforeIteration();
@@ -63,29 +63,31 @@ pFlow::sphereDEMSystem::sphereDEMSystem(
 		word  demSystemName,
 		const std::vector<box>& domains,
 		int argc, 
-		char* argv[])
+		char* argv[],
+		bool requireRVel)
 :
-	DEMSystem(demSystemName, domains, argc, argv)
+	DEMSystem(demSystemName, domains, argc, argv),
+	requireRVel_(requireRVel)
 { 
 	
-	REPORT(0)<<"\nReading proprties . . . "<<endREPORT;
+	REPORT(0)<<"\nReading proprties . . . "<<END_REPORT;
 	property_ = makeUnique<property>(
-    	Control().caseSetup().path()+propertyFile__);
+		propertyFile__,
+    	Control().caseSetup().path());
 
-	REPORT(0)<< "\nCreating surface geometry for sphereDEMSystem . . . "<<endREPORT;
+	REPORT(0)<< "\nCreating surface geometry for sphereDEMSystem . . . "<<END_REPORT;
 	geometry_ = geometry::create(Control(), Property());
 
 
-	REPORT(0)<<"\nReading sphere particles . . ."<<endREPORT;
+	REPORT(0)<<"\nReading sphere particles . . ."<<END_REPORT;
 	particles_ = makeUnique<sphereFluidParticles>(Control(), Property());
 
 
 	insertion_ = makeUnique<sphereInsertion>( 
-		Control().caseSetup().path()+insertionFile__, 
 		particles_(), 
-		particles_().shapes());
+		particles_().spheres());
 	
-	REPORT(0)<<"\nCreating interaction model for sphere-sphere contact and sphere-wall contact . . ."<<endREPORT;
+	REPORT(0)<<"\nCreating interaction model for sphere-sphere contact and sphere-wall contact . . ."<<END_REPORT;
 	interaction_ = interaction::create(
 		Control(),
 		Particles(),
@@ -98,6 +100,7 @@ pFlow::sphereDEMSystem::sphereDEMSystem(
 
 }
 
+
 pFlow::sphereDEMSystem::~sphereDEMSystem()
 {
 	
@@ -119,8 +122,8 @@ bool pFlow::sphereDEMSystem::updateParticleDistribution(
 	}
 
 	if(!particleDistribution_->locateParticles(
-			parPosition_, 
-			particles_->pStruct().activePointsMaskH()))
+			positionHost_, 
+			particles_->pStruct().activePointsMaskHost()))
 	{
 		fatalErrorInFunction<<
 		"error in locating particles among sub-domains"<<endl;
@@ -137,7 +140,7 @@ pFlow::int32
 }
 
 std::vector<pFlow::int32> 
-	pFlow::sphereDEMSystem::numParInDomain()const
+	pFlow::sphereDEMSystem::numParInDomains()const
 {
 	const auto& distribute = particleDistribution_();
 	int32 numDomains = distribute.numDomains();
@@ -156,31 +159,56 @@ pFlow::sphereDEMSystem::parIndexInDomain(int32 di)const
 	return particleDistribution_->particlesInDomain(di);
 }
 
-pFlow::span<pFlow::real> pFlow::sphereDEMSystem::parDiameter() 
+pFlow::span<pFlow::real> pFlow::sphereDEMSystem::diameter() 
 {	
-	return span<real>(parDiameter_.data(), parDiameter_.size());
+	return span<real>(diameterHost_.data(), diameterHost_.size());
 }
 
-pFlow::span<pFlow::realx3> pFlow::sphereDEMSystem::parVelocity()  
+pFlow::span<pFlow::real> pFlow::sphereDEMSystem::courseGrainFactor()
 {
-	return span<realx3>(parVelocity_.data(), parVelocity_.size());
+    return span<real>(nullptr, 0);
 }
 
-pFlow::span<pFlow::realx3> pFlow::sphereDEMSystem::parPosition()  
+pFlow::span<pFlow::realx3> pFlow::sphereDEMSystem::acceleration()
 {
-	return span<realx3>(parPosition_.data(), parPosition_.size());
+    return span<realx3>(nullptr, 0);
+}
+
+pFlow::span<pFlow::realx3> pFlow::sphereDEMSystem::velocity()  
+{
+	return span<realx3>(velocityHost_.data(), velocityHost_.size());
+}
+
+pFlow::span<pFlow::realx3> pFlow::sphereDEMSystem::position()  
+{
+	return span<realx3>(positionHost_.data(), positionHost_.size());
+}
+
+pFlow::span<pFlow::realx3> pFlow::sphereDEMSystem::rAcceleration()
+{
+    return span<realx3>(nullptr, 0);
+}
+
+pFlow::span<pFlow::realx3> pFlow::sphereDEMSystem::rVelocity()
+{
+    return span<realx3>(rVelocityHost_.data(), rVelocityHost_.size());
+}
+
+pFlow::span<pFlow::realx3> pFlow::sphereDEMSystem::rPosition()
+{
+    return span<realx3>(nullptr, 0);
 }
 
 pFlow::span<pFlow::realx3> pFlow::sphereDEMSystem::parFluidForce() 
 {
-	auto& hVec =  particles_->fluidForceHostAll();
+	auto& hVec =  particles_->fluidForceHost();
 	
 	return span<realx3>(hVec.data(), hVec.size());
 }
 
 pFlow::span<pFlow::realx3> pFlow::sphereDEMSystem::parFluidTorque() 
 {
-	auto& hVec =  particles_->fluidTorqueHostAll();
+	auto& hVec =  particles_->fluidTorqueHost();
 	return span<realx3>(hVec.data(), hVec.size());
 }
 
@@ -198,9 +226,14 @@ bool pFlow::sphereDEMSystem::sendFluidTorqueToDEM()
 
 bool pFlow::sphereDEMSystem::beforeIteration()
 {
-	parVelocity_ = particles_->dynPointStruct().velocityHostAll();
-	parPosition_ = particles_->dynPointStruct().pointPositionHostAll();
-	parDiameter_ = particles_->diameter().hostVectorAll();
+	velocityHost_ = std::as_const(particles_()).velocity().hostView();
+	positionHost_ = std::as_const(particles_()).pointPosition().hostView();
+	diameterHost_ = particles_->diameter().hostView();
+
+	if(requireRVel_)
+		rVelocityHost_ = std::as_const(particles_()).rVelocity().hostView();
+	
+
 	return true;
 }
 

DEMSystems/sphereDEMSystem/sphereDEMSystem.hpp

@@ -55,11 +55,16 @@ protected:
 	uniquePtr<domainDistribute> 	particleDistribution_=nullptr;
 
 	// to be used for CPU communications 
-	ViewType1D<realx3, HostSpace>  parVelocity_;
+	ViewType1D<realx3, HostSpace> 	velocityHost_;
 
-	ViewType1D<realx3, HostSpace>  parPosition_;
+	ViewType1D<realx3, HostSpace> 	positionHost_;
+
+	ViewType1D<real, HostSpace> 	diameterHost_;
+
+	bool 							requireRVel_ = false;
+
+	ViewType1D<realx3, HostSpace> 	rVelocityHost_;
 
-	ViewType1D<real, HostSpace> parDiameter_;
 
 //  protected member functions
 	auto& Property()
@@ -92,7 +97,8 @@ public:
 		word  demSystemName,
 		const std::vector<box>& domains,
 		int argc, 
-		char* argv[]);
+		char* argv[],
+		bool requireRVel=false);
 
 	virtual ~sphereDEMSystem();
 
@@ -110,15 +116,25 @@ public:
 	 
 	int32 numParInDomain(int32 di)const override;
 	
-	std::vector<int32> numParInDomain()const override;
+	std::vector<int32> numParInDomains()const override;
 
 	span<const int32> parIndexInDomain(int32 di)const override;
 
-	span<real> parDiameter() override;
+	span<real> diameter() override;
 
-	span<realx3> parVelocity() override;
+	span<real> courseGrainFactor() override;
 
-	span<realx3> parPosition() override;
+	span<realx3> acceleration() override;
+
+	span<realx3> velocity() override;
+
+	span<realx3> position() override;
+
+	span<realx3> rAcceleration() override;
+
+	span<realx3> rVelocity() override;
+
+	span<realx3> rPosition() override;
 
 	span<realx3> parFluidForce() override;
 

DEMSystems/sphereDEMSystem/sphereFluidParticles.cpp

@@ -21,42 +21,44 @@ Licence:
 #include "sphereFluidParticles.hpp"
 #include "sphereFluidParticlesKernels.hpp"
 
+void pFlow::sphereFluidParticles::checkHostMemory()
+{
+	if(fluidForce_.size()!=fluidForceHost_.size())
+	{
+		resizeNoInit(fluidForceHost_, fluidForce_.size());
+		resizeNoInit(fluidTorqueHost_, fluidTorque_.size());
+	}
+}
 
 pFlow::sphereFluidParticles::sphereFluidParticles(
     systemControl &control,
-	const property& prop
-)
-:
-	sphereParticles(control, prop),
+    const property &prop)
+    : sphereParticles(control, prop),
       fluidForce_(
-		this->time().emplaceObject<realx3PointField_HD>(
           objectFile(
               "fluidForce",
               "",
               objectFile::READ_IF_PRESENT,
-				objectFile::WRITE_ALWAYS
-				),
-			pStruct(),
-			zero3
-			)
-		),
+              objectFile::WRITE_ALWAYS),
+          dynPointStruct(),
+          zero3),
       fluidTorque_(
-		this->time().emplaceObject<realx3PointField_HD>(
           objectFile(
               "fluidTorque",
               "",
               objectFile::READ_IF_PRESENT,
-				objectFile::WRITE_ALWAYS
-				),
-			pStruct(),
-			zero3
-			)
-		)
-{} 
+              objectFile::WRITE_NEVER),
+          dynPointStruct(),
+          zero3)
+{
+	checkHostMemory();
+} 
 
 bool pFlow::sphereFluidParticles::beforeIteration()
 {
 	sphereParticles::beforeIteration();
+	checkHostMemory();
+
 	return true;
 }
 
@@ -64,42 +66,40 @@ bool pFlow::sphereFluidParticles::beforeIteration()
 bool pFlow::sphereFluidParticles::iterate() 
 {
 
-	accelerationTimer_.start();
+	accelerationTimer().start();
 		pFlow::sphereFluidParticlesKernels::acceleration(
 			control().g(),
-			mass().deviceVectorAll(),
-			contactForce().deviceVectorAll(),
-			fluidForce().deviceVectorAll(),
-			I().deviceVectorAll(),
-			contactTorque().deviceVectorAll(),
-			fluidTorque().deviceVectorAll(),
-			pStruct().activePointsMaskD(),
-			accelertion().deviceVectorAll(),
-			rAcceleration().deviceVectorAll()
+			mass().deviceViewAll(),
+			contactForce().deviceViewAll(),
+			fluidForce_.deviceViewAll(),
+			I().deviceViewAll(),
+			contactTorque().deviceViewAll(),
+			fluidTorque_.deviceViewAll(),
+			pStruct().activePointsMaskDevice(),
+			accelertion().deviceViewAll(),
+			rAcceleration().deviceViewAll()
 			);
-	accelerationTimer_.end();
+	accelerationTimer().end();
 	
-	intCorrectTimer_.start();
+	intCorrectTimer().start();
 	
-		dynPointStruct_.correct(this->dt(), accelertion_);
+		dynPointStruct().correct(this->dt(), accelertion());
 	
-		rVelIntegration_().correct(this->dt(), rVelocity_, rAcceleration_);
+		rVelIntegration().correct(this->dt(), rVelocity(), rAcceleration());
 	
-	intCorrectTimer_.end();
+	intCorrectTimer().end();
 	
 	return true;
 }
 
 void pFlow::sphereFluidParticles::fluidForceHostUpdatedSync()
 {
-	fluidForce_.modifyOnHost();
-	fluidForce_.syncViews();
+	copy(fluidForce_.deviceView(), fluidForceHost_);
 	return;
 }
 
 void pFlow::sphereFluidParticles::fluidTorqueHostUpdatedSync()
 {
-	fluidTorque_.modifyOnHost();
-	fluidTorque_.syncViews();
+	copy(fluidTorque_.deviceView(), fluidTorqueHost_);
 	return;
 }

DEMSystems/sphereDEMSystem/sphereFluidParticles.hpp

@@ -43,12 +43,17 @@ class sphereFluidParticles
 protected:
 	
 	/// pointField of rotational acceleration of particles on device  
-	realx3PointField_HD& 	fluidForce_;
+	realx3PointField_D 		fluidForce_;
 
-	realx3PointField_HD& 	fluidTorque_;
+	hostViewType1D<realx3> 	fluidForceHost_;
 
+	realx3PointField_D 		fluidTorque_;
 
-	void zeroFluidForce_H()
+	hostViewType1D<realx3>	fluidTorqueHost_;
+
+	void checkHostMemory();
+
+	/*void zeroFluidForce_H()
 	{
 		fluidForce_.fillHost(zero3);
 	}
@@ -56,7 +61,7 @@ protected:
 	void zeroFluidTorque_H()
 	{
 		fluidTorque_.fillHost(zero3);
-	}
+	}*/
 
 public:
 
@@ -81,17 +86,16 @@ public:
 	}
 
 
-	auto& fluidForceHostAll()
+	auto& fluidForceHost()
 	{
-		return fluidForce_.hostVectorAll();
+		return fluidForceHost_; 
 	}
 
-	auto& fluidTorqueHostAll()
+	auto& fluidTorqueHost()
 	{
-		return fluidTorque_.hostVectorAll();
+		return fluidTorqueHost_;
 	}
 
-
 	void fluidForceHostUpdatedSync();
 
 	void fluidTorqueHostUpdatedSync();

DEMSystems/sphereDEMSystem/sphereFluidParticlesKernels.hpp

@@ -46,7 +46,7 @@ void acceleration(
 {
 
 	auto activeRange = incld.activeRange();
-	if(incld.allActive())
+	if(incld.isAllActive())
 	{
 		Kokkos::parallel_for(
 		"pFlow::sphereParticlesKernels::acceleration",

README.md

@@ -3,10 +3,18 @@
 </div>
 
 
-**PhasicFlow** is a parallel C++ code for performing DEM simulations. It can run on shared-memory multi-core computational units such as multi-core CPUs or GPUs (for now it works on CUDA-enabled GPUs). The parallelization method mainly relies on loop-level parallelization on a shared-memory computational unit. You can build and run PhasicFlow in serial mode on regular PCs, in parallel mode for multi-core CPUs, or build it for a GPU device to off-load computations to a GPU. In its current statues you can simulate millions of particles (up to 32M particles tested) on a single desktop computer. You can see the [performance tests of PhasicFlow](https://github.com/PhasicFlow/phasicFlow/wiki/Performance-of-phasicFlow) in the wiki page. 
+**PhasicFlow** is a parallel C++ code for performing DEM simulations. It can run on shared-memory multi-core computational units such as multi-core CPUs or GPUs (for now it works on CUDA-enabled GPUs). The parallelization method mainly relies on loop-level parallelization on a shared-memory computational unit. You can build and run PhasicFlow in serial mode on regular PCs, in parallel mode for multi-core CPUs, or build it for a GPU device to off-load computations to a GPU. In its current statues you can simulate millions of particles (up to 80M particles tested) on a single desktop computer. You can see the [performance tests of PhasicFlow](https://github.com/PhasicFlow/phasicFlow/wiki/Performance-of-phasicFlow) in the wiki page.
 
+**MPI** parallelization with dynamic load balancing is under development. With this level of parallelization, PhasicFlow can leverage the computational power of **multi-gpu** workstations or clusters with distributed memory CPUs. 
+In summary PhasicFlow can have 6 execution modes:
+1. Serial on a single CPU core,
+2. Parallel on a multi-core computer/node (using OpenMP),
+3. Parallel on an nvidia-GPU (using Cuda),
+4. Parallel on distributed memory workstation (Using MPI)
+5. Parallel on distributed memory workstations with multi-core nodes (using MPI+OpenMP)
+6. Parallel on workstations with multiple GPUs (using MPI+Cuda).
 ## How to build?
-You can build PhasicFlow for CPU and GPU executions. [Here is a complete step-by-step procedure](https://github.com/PhasicFlow/phasicFlow/wiki/How-to-Build-PhasicFlow).
+You can build PhasicFlow for CPU and GPU executions. The latest release of PhasicFlow is v-0.1. [Here is a complete step-by-step procedure for building phasicFlow-v-0.1.](https://github.com/PhasicFlow/phasicFlow/wiki/How-to-Build-PhasicFlow).
 
 ## Online code documentation
 You can find a full documentation of the code, its features, and other related materials on [online documentation of the code](https://phasicflow.github.io/phasicFlow/)
@@ -22,3 +30,19 @@ PhasicFlowPlus is and extension to PhasicFlow for simulating particle-fluid syst
 * [Kokkos](https://github.com/kokkos/kokkos) from National Technology & Engineering Solutions of Sandia, LLC (NTESS)
 * [CLI11 1.8](https://github.com/CLIUtils/CLI11) from University of Cincinnati.
 
+## How to cite PhasicFlow
+If you are using PhasicFlow in your research or industrial work, cite the following [article](https://www.sciencedirect.com/science/article/pii/S0010465523001662):
+```
+@article{NOROUZI2023108821,
+title = {PhasicFlow: A parallel, multi-architecture open-source code for DEM simulations},
+journal = {Computer Physics Communications},
+volume = {291},
+pages = {108821},
+year = {2023},
+issn = {0010-4655},
+doi = {https://doi.org/10.1016/j.cpc.2023.108821},
+url = {https://www.sciencedirect.com/science/article/pii/S0010465523001662},
+author = {H.R. Norouzi},
+keywords = {Discrete element method, Parallel computing, CUDA, GPU, OpenMP, Granular flow}
+}
+```

cmake/autoComplete

@@ -0,0 +1,33 @@
+PF_cFlags="--description --help --version"
+
+_pFlowToVTK(){
+    if [ "$3" == "--time" ]; then
+      COMPREPLY=( $(ls) )
+    else
+      COMPREPLY=( $(compgen -W "$PF_cFlags --binary --no-geometry --no-particles --out-folder --time --separate-surfaces --fields" -- "$2") )
+    fi
+}
+complete -F _pFlowToVTK pFlowToVTK
+
+_postprocessPhasicFlow(){
+    if [ "$3" == "--time" ]; then
+      COMPREPLY=( $(ls) )
+    else
+      COMPREPLY=( $(compgen -W "$PF_cFlags --out-folder --time --zeroFolder" -- "$2") )
+    fi
+}
+complete -F _postprocessPhasicFlow postprocessPhasicFlow
+
+complete -W "$PF_cFlags --positionParticles-only --setFields-only --coupling" particlesPhasicFlow
+
+complete -W "$PF_cFlags --coupling" geometryPhasicFlow 
+
+complete -W "$PF_cFlags --coupling" iterateGeometry
+
+complete -W "$PF_cFlags" iterateSphereParticles
+
+complete -W "$PF_cFlags" sphereGranFlow
+
+complete -W "$PF_cFlags" grainGranFlow
+
+complete -W "$PF_cFlags" checkPhasicFlow

cmake/bashrc

@@ -1,8 +1,7 @@
 
-export pFlow_PROJECT_VERSION=v0.1
-
-export pFlow_PROJECT=phasicFlow
+export pFlow_PROJECT_VERSION=v-1.0
 
+export pFlow_PROJECT="phasicFlow-$pFlow_PROJECT_VERSION"
 
 projectDir="$HOME/PhasicFlow" 
 kokkosDir="$HOME/Kokkos/kokkos"
@@ -20,6 +19,8 @@ export pFlow_SRC_DIR="$pFlow_PROJECT_DIR/src"
 
 export Kokkos_DIR="$kokkosDir"
 
+export Zoltan_DIR="$projectDir/Zoltan"
+
 # Cleanup variables (done as final statement for a clean exit code)
 unset projectDir
 
@@ -27,5 +28,7 @@ export PATH="$pFlow_BIN_DIR:$PATH"
 
 export LD_LIBRARY_PATH="$pFlow_LIB_DIR:$LD_LIBRARY_PATH"
 
+export LD_LIBRARY_PATH="$Zoltan_DIR/lib:$LD_LIBRARY_PATH"
 
+source $pFlow_PROJECT_DIR/cmake/autoComplete 
 #------------------------------------------------------------------------------

cmake/globals.cmake

@@ -2,3 +2,52 @@
 set(validFiles)
 list(APPEND validFiles *.C *.cpp *.cxx *.c *.cu *.H *.hpp *.hxx *.h *.cuh)
 
+macro(Kokkos_cmake_settings)
+
+#mark_as_advanced(FORCE var Kokkos_ENABLE_CUDA_LAMBDA)
+mark_as_advanced(FORCE var Kokkos_CXX_STANDARD)
+#mark_as_advanced(FORCE var Kokkos_ENABLE_CUDA_CONSTEXPR)
+mark_as_advanced(FORCE var Kokkos_ENABLE_OPENMP)
+mark_as_advanced(FORCE var Kokkos_ENABLE_SERIAL)
+mark_as_advanced(FORCE var Kokkos_ENABLE_CUDA)
+mark_as_advanced(FORCE var Kokkos_ENABLE_HIP)
+mark_as_advanced(FORCE var Kokkos_ENABLE_AGGRESSIVE_VECTORIZATION)
+mark_as_advanced(FORCE var Kokkos_ENABLE_BENCHMARKS)
+mark_as_advanced(FORCE var Kokkos_ENABLE_COMPILE_AS_CMAKE_LANGUAGE)
+mark_as_advanced(FORCE var Kokkos_ENABLE_CUDA_LDG_INTRINSIC)
+mark_as_advanced(FORCE var Kokkos_ENABLE_CUDA_RELOCATABLE_DEVICE_CODE)
+mark_as_advanced(FORCE var Kokkos_ENABLE_CUDA_UVM)
+mark_as_advanced(FORCE var Kokkos_ENABLE_DEPRECATED_CODE_3)
+mark_as_advanced(FORCE var Kokkos_ENABLE_DEPRECATED_CODE_4)
+mark_as_advanced(FORCE var Kokkos_ENABLE_DEPRECATION_WARNINGS)
+mark_as_advanced(FORCE var Kokkos_ENABLE_DESUL_ATOMICS_EXTERNAL)
+mark_as_advanced(FORCE var Kokkos_ENABLE_EXAMPLES)
+mark_as_advanced(FORCE var Kokkos_ENABLE_HEADER_SELF_CONTAINMENT_TESTS)
+mark_as_advanced(FORCE var Kokkos_ENABLE_HIP_MULTIPLE_KERNEL_INSTANTIATIONS)
+mark_as_advanced(FORCE var Kokkos_ENABLE_HIP_RELOCATABLE_DEVICE_CODE)
+mark_as_advanced(FORCE var Kokkos_ENABLE_HPX)
+mark_as_advanced(FORCE var Kokkos_ENABLE_HWLOC)
+mark_as_advanced(FORCE var Kokkos_ENABLE_IMPL_CUDA_MALLOC_ASYNC)
+mark_as_advanced(FORCE var Kokkos_ENABLE_IMPL_HPX_ASYNC_DISPATCH)
+mark_as_advanced(FORCE var Kokkos_ENABLE_LARGE_MEM_TESTS)
+mark_as_advanced(FORCE var Kokkos_ENABLE_DEBUG_DUALVIEW_MODIFY_CHECK)
+mark_as_advanced(FORCE var Kokkos_ENABLE_LIBQUADMATH)
+mark_as_advanced(FORCE var Kokkos_ENABLE_LIBRT)
+mark_as_advanced(FORCE var Kokkos_ENABLE_MEMKIND)
+mark_as_advanced(FORCE var Kokkos_ENABLE_ONEDPL)
+mark_as_advanced(FORCE var Kokkos_ENABLE_OPENACC)
+mark_as_advanced(FORCE var Kokkos_ENABLE_OPENMPTARGET)
+mark_as_advanced(FORCE var Kokkos_ENABLE_ROCM)
+mark_as_advanced(FORCE var Kokkos_ENABLE_SYCL)
+mark_as_advanced(FORCE var Kokkos_ENABLE_TESTS)
+mark_as_advanced(FORCE var Kokkos_ENABLE_THREADS)
+mark_as_advanced(FORCE var Kokkos_ENABLE_TUNING)
+mark_as_advanced(FORCE var Kokkos_ENABLE_UNSUPPORTED_ARCHS)
+mark_as_advanced(FORCE var Kokkos_HPX_DIR)
+mark_as_advanced(FORCE var Kokkos_HWLOC_DIR)
+mark_as_advanced(FORCE var Kokkos_MEMKIND_DIR)
+mark_as_advanced(FORCE var Kokkos_ROCM_DIR)
+mark_as_advanced(FORCE var Kokkos_THREADS_DIR)
+
+endmacro()
+

cmake/makeExecutableGlobals.cmake

@@ -31,8 +31,8 @@ target_include_directories(${target_name}
 
 message(STATUS "\nCreating make file for executable ${target_name}")
 message(STATUS "  ${target_name} link libraries are: ${${target_link_libs}}")
-message(STATUS "  ${target_name} source files are: ${source_files}")
-message(STATUS "  ${target_name} include dirs are: ${includeDirs}\n")
+#message(STATUS "  ${target_name} source files are: ${${source_files}}")
+#message(STATUS "  ${target_name} include dirs are: ${includeDirs}\n")
 
 
 install(TARGETS ${target_name} DESTINATION bin)

cmake/makeLibraryGlobals.cmake

@@ -41,8 +41,8 @@ target_include_directories(${target_name}
 
 message(STATUS "\nCreating make file for library ${target_name}")
 message(STATUS "  ${target_name} link libraries are: ${${target_link_libs}}")
-message(STATUS "  ${target_name} source files are: ${source_files}")
-message(STATUS "  ${target_name} include dirs are: ${includeDirs}\n")
+#message(STATUS "  ${target_name} source files are: ${source_files}")
+#message(STATUS "  ${target_name} include dirs are: ${includeDirs}\n \n")
 
 install(TARGETS ${target_name} DESTINATION lib)
 install(FILES ${includeFiles}  DESTINATION include/${target_name})

doc/code-documentation/html/AB2Kernels_8hpp.html

@@ -0,0 +1,146 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+<html xmlns="http://www.w3.org/1999/xhtml">
+<head>
+<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
+<meta http-equiv="X-UA-Compatible" content="IE=9"/>
+<meta name="generator" content="Doxygen 1.8.17"/>
+<meta name="description" content="PhasicFlow is an open-source parallel DEM (discrete element method) package for simulating granular flow. It is developed in C++ and can be exectued on both GPU (like CUDA) and CPU.">
+<title>PhasicFlow: src/Integration/AdamsBashforth2/AB2Kernels.hpp File Reference</title>
+<link href="tabs.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="jquery.js"></script>
+<script type="text/javascript" src="dynsections.js"></script>
+<link href="navtree.css" rel="stylesheet" type="text/css"/>
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+<script type="text/javascript" src="navtreedata.js"></script>
+<script type="text/javascript" src="navtree.js"></script>
+<link href="search/search.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="search/searchdata.js"></script>
+<script type="text/javascript" src="search/search.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(function() { init_search(); });
+/* @license-end */
+</script>
+<script type="text/x-mathjax-config">
+  MathJax.Hub.Config({
+    extensions: ["tex2jax.js"],
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+<script type="text/javascript" async="async" src="http://cdn.mathjax.org/mathjax/latest/MathJax.js"></script>
+<link href="doxygen.css" rel="stylesheet" type="text/css" />
+<link href="customdoxygen.css" rel="stylesheet" type="text/css"/>
+</head>
+<body>
+<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
+<div id="titlearea">
+<table cellspacing="0" >
+ <tbody>
+ <tr>
+    <td id="projectlogo"><a href="https://github.com/PhasicFlow"><img alt="Logo" src="phasicFlow_logo.png"></a></td>
+   <td>        <div id="MSearchBox" class="MSearchBoxInactive">
+        <span class="left">
+          <img id="MSearchSelect" src="search/mag_sel.png"
+               onmouseover="return searchBox.OnSearchSelectShow()"
+               onmouseout="return searchBox.OnSearchSelectHide()"
+               alt=""/>
+          <input type="text" id="MSearchField" value="Search" accesskey="S"
+               onfocus="searchBox.OnSearchFieldFocus(true)" 
+               onblur="searchBox.OnSearchFieldFocus(false)" 
+               onkeyup="searchBox.OnSearchFieldChange(event)"/>
+          </span><span class="right">
+            <a id="MSearchClose" href="javascript:searchBox.CloseResultsWindow()"><img id="MSearchCloseImg" border="0" src="search/close.png" alt=""/></a>
+          </span>
+        </div>
+</td>
+ </tr>
+<tr>
+  <td id="projectbrief">
+    <a href="https://https://cemf.ir">www.cemf.ir</a>
+  </td>
+</tr>
+ </tbody>
+</table>
+</div>
+<!-- end header part -->
+<!-- Generated by Doxygen 1.8.17 -->
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+var searchBox = new SearchBox("searchBox", "search",false,'Search');
+/* @license-end */
+</script>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
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+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('AB2Kernels_8hpp.html',''); initResizable(); });
+/* @license-end */
+</script>
+<div id="doc-content">
+<!-- window showing the filter options -->
+<div id="MSearchSelectWindow"
+     onmouseover="return searchBox.OnSearchSelectShow()"
+     onmouseout="return searchBox.OnSearchSelectHide()"
+     onkeydown="return searchBox.OnSearchSelectKey(event)">
+</div>
+
+<!-- iframe showing the search results (closed by default) -->
+<div id="MSearchResultsWindow">
+<iframe src="javascript:void(0)" frameborder="0" 
+        name="MSearchResults" id="MSearchResults">
+</iframe>
+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#namespaces">Namespaces</a> &#124;
+<a href="#func-members">Functions</a>  </div>
+  <div class="headertitle">
+<div class="title">AB2Kernels.hpp File Reference</div>  </div>
+</div><!--header-->
+<div class="contents">
+<div class="textblock"><div id="dynsection-0" onclick="return toggleVisibility(this)" class="dynheader closed" style="cursor:pointer;">
+  <img id="dynsection-0-trigger" src="closed.png" alt="+"/> Include dependency graph for AB2Kernels.hpp:</div>
+<div id="dynsection-0-summary" class="dynsummary" style="display:block;">
+</div>
+<div id="dynsection-0-content" class="dyncontent" style="display:none;">
+<div class="center"><img src="AB2Kernels_8hpp__incl.png" border="0" usemap="#src_2Integration_2AdamsBashforth2_2AB2Kernels_8hpp" alt=""/></div>
+</div>
+</div>
+<p><a href="AB2Kernels_8hpp_source.html">Go to the source code of this file.</a></p>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="namespaces"></a>
+Namespaces</h2></td></tr>
+<tr class="memitem:namespacepFlow"><td class="memItemLeft" align="right" valign="top"> &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepFlow.html">pFlow</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:namespacepFlow_1_1AB2Kernels"><td class="memItemLeft" align="right" valign="top"> &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepFlow_1_1AB2Kernels.html">pFlow::AB2Kernels</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="func-members"></a>
+Functions</h2></td></tr>
+<tr class="memitem:a1d3752d19417e5f211093381ef34cbc9"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepFlow_1_1AB2Kernels.html#a1d3752d19417e5f211093381ef34cbc9">intAllActive</a> (const word &amp;name, real dt, rangeU32 activeRng, const deviceViewType1D&lt; realx3 &gt; &amp;y, const deviceViewType1D&lt; realx3 &gt; &amp;dy, const deviceViewType1D&lt; realx3 &gt; &amp;dy1)</td></tr>
+<tr class="separator:a1d3752d19417e5f211093381ef34cbc9"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a0e684a0c67df0388c9ab00a8abea55c4"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepFlow_1_1AB2Kernels.html#a0e684a0c67df0388c9ab00a8abea55c4">intScattered</a> (const word &amp;name, real dt, const pFlagTypeDevice &amp;activePoints, const deviceViewType1D&lt; realx3 &gt; &amp;y, const deviceViewType1D&lt; realx3 &gt; &amp;dy, const deviceViewType1D&lt; realx3 &gt; &amp;dy1)</td></tr>
+<tr class="separator:a0e684a0c67df0388c9ab00a8abea55c4"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_68267d1309a1af8e8297ef4c3efbcdba.html">src</a></li><li class="navelem"><a class="el" href="dir_5ff0557589c78f704a7131791f9a8bc6.html">Integration</a></li><li class="navelem"><a class="el" href="dir_eb84e0c9bccf6469316a77378e4a6fe1.html">AdamsBashforth2</a></li><li class="navelem"><a class="el" href="AB2Kernels_8hpp.html">AB2Kernels.hpp</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.17 </li>
+  </ul>
+</div>
+</body>
+</html>

doc/code-documentation/html/AB2Kernels_8hpp.js

@@ -0,0 +1,5 @@
+var AB2Kernels_8hpp =
+[
+    [ "intAllActive", "AB2Kernels_8hpp.html#a1d3752d19417e5f211093381ef34cbc9", null ],
+    [ "intScattered", "AB2Kernels_8hpp.html#a0e684a0c67df0388c9ab00a8abea55c4", null ]
+];

doc/code-documentation/html/AB2Kernels_8hpp__incl.dot

@@ -0,0 +1,11 @@
+digraph "src/Integration/AdamsBashforth2/AB2Kernels.hpp"
+{
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+  node [fontname="Helvetica",fontsize="10",shape=record];
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+  Node2 [label="KokkosTypes.hpp",height=0.2,width=0.4,color="red", fillcolor="white", style="filled",URL="$KokkosTypes_8hpp.html",tooltip=" "];
+  Node1 -> Node9 [color="midnightblue",fontsize="10",style="solid",fontname="Helvetica"];
+  Node9 [label="types.hpp",height=0.2,width=0.4,color="red", fillcolor="white", style="filled",URL="$types_8hpp.html",tooltip=" "];
+}

doc/code-documentation/html/AB2Kernels_8hpp_source.html

@@ -0,0 +1,198 @@
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+<meta name="description" content="PhasicFlow is an open-source parallel DEM (discrete element method) package for simulating granular flow. It is developed in C++ and can be exectued on both GPU (like CUDA) and CPU.">
+<title>PhasicFlow: src/Integration/AdamsBashforth2/AB2Kernels.hpp Source File</title>
+<link href="tabs.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="jquery.js"></script>
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+/* @license-end */
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+  MathJax.Hub.Config({
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+<table cellspacing="0" >
+ <tbody>
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+          </span>
+        </div>
+</td>
+ </tr>
+<tr>
+  <td id="projectbrief">
+    <a href="https://https://cemf.ir">www.cemf.ir</a>
+  </td>
+</tr>
+ </tbody>
+</table>
+</div>
+<!-- end header part -->
+<!-- Generated by Doxygen 1.8.17 -->
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+var searchBox = new SearchBox("searchBox", "search",false,'Search');
+/* @license-end */
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+$(document).ready(function(){initNavTree('AB2Kernels_8hpp_source.html',''); initResizable(); });
+/* @license-end */
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+<!-- window showing the filter options -->
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+</div>
+
+<div class="header">
+  <div class="headertitle">
+<div class="title">AB2Kernels.hpp</div>  </div>
+</div><!--header-->
+<div class="contents">
+<a href="AB2Kernels_8hpp.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno">    1</span>&#160; </div>
+<div class="line"><a name="l00002"></a><span class="lineno">    2</span>&#160; </div>
+<div class="line"><a name="l00003"></a><span class="lineno">    3</span>&#160;<span class="preprocessor">#ifndef __AB2Kernels_hpp__</span></div>
+<div class="line"><a name="l00004"></a><span class="lineno">    4</span>&#160;<span class="preprocessor">#define __AB2Kernels_hpp__</span></div>
+<div class="line"><a name="l00005"></a><span class="lineno">    5</span>&#160; </div>
+<div class="line"><a name="l00006"></a><span class="lineno">    6</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="KokkosTypes_8hpp.html">KokkosTypes.hpp</a>&quot;</span></div>
+<div class="line"><a name="l00007"></a><span class="lineno">    7</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="types_8hpp.html">types.hpp</a>&quot;</span></div>
+<div class="line"><a name="l00008"></a><span class="lineno">    8</span>&#160; </div>
+<div class="line"><a name="l00009"></a><span class="lineno"><a class="line" href="namespacepFlow_1_1AB2Kernels.html">    9</a></span>&#160;<span class="keyword">namespace </span><a class="code" href="namespacepFlow_1_1AB2Kernels.html">pFlow::AB2Kernels</a></div>
+<div class="line"><a name="l00010"></a><span class="lineno">   10</span>&#160;{</div>
+<div class="line"><a name="l00011"></a><span class="lineno">   11</span>&#160;<span class="keyword">inline</span></div>
+<div class="line"><a name="l00012"></a><span class="lineno"><a class="line" href="namespacepFlow_1_1AB2Kernels.html#a1d3752d19417e5f211093381ef34cbc9">   12</a></span>&#160;<span class="keywordtype">bool</span> <a class="code" href="namespacepFlow_1_1AB2Kernels.html#a1d3752d19417e5f211093381ef34cbc9">intAllActive</a>(</div>
+<div class="line"><a name="l00013"></a><span class="lineno">   13</span>&#160;    <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">word</a>&amp; name,</div>
+<div class="line"><a name="l00014"></a><span class="lineno">   14</span>&#160;    <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
+<div class="line"><a name="l00015"></a><span class="lineno">   15</span>&#160;    <a class="code" href="structpFlow_1_1Range.html">rangeU32</a> activeRng,</div>
+<div class="line"><a name="l00016"></a><span class="lineno">   16</span>&#160;    <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#aa5276597d4016d6696f1f265a13d2164">deviceViewType1D&lt;realx3&gt;</a>&amp; y, </div>
+<div class="line"><a name="l00017"></a><span class="lineno">   17</span>&#160;    <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#aa5276597d4016d6696f1f265a13d2164">deviceViewType1D&lt;realx3&gt;</a>&amp; dy,</div>
+<div class="line"><a name="l00018"></a><span class="lineno">   18</span>&#160;    <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#aa5276597d4016d6696f1f265a13d2164">deviceViewType1D&lt;realx3&gt;</a>&amp; dy1</div>
+<div class="line"><a name="l00019"></a><span class="lineno">   19</span>&#160;)</div>
+<div class="line"><a name="l00020"></a><span class="lineno">   20</span>&#160;{</div>
+<div class="line"><a name="l00021"></a><span class="lineno">   21</span>&#160;    Kokkos::parallel_for(</div>
+<div class="line"><a name="l00022"></a><span class="lineno">   22</span>&#160;        name,</div>
+<div class="line"><a name="l00023"></a><span class="lineno">   23</span>&#160;        <a class="code" href="namespacepFlow.html#a6ea32be3339f3023ab349c9c3775c916">deviceRPolicyStatic</a> (activeRng.<a class="code" href="structpFlow_1_1Range.html#a8ade4cd349991c4c7ed9131410ddd8f0">start</a>(), activeRng.<a class="code" href="structpFlow_1_1Range.html#a38ebf09d6bfa7f04d4a95ff7f0d3aef4">end</a>()),</div>
+<div class="line"><a name="l00024"></a><span class="lineno">   24</span>&#160;        <a class="code" href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a>(<a class="code" href="namespacepFlow.html#abd01e8e67e3d94cab04ecaaf4f85ac1b">uint32</a> i){</div>
+<div class="line"><a name="l00025"></a><span class="lineno">   25</span>&#160;            y[i] +=  dt*(<span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(1.5) * dy[i] - <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(0.5) * dy1[i]);</div>
+<div class="line"><a name="l00026"></a><span class="lineno">   26</span>&#160;            dy1[i] = dy[i];</div>
+<div class="line"><a name="l00027"></a><span class="lineno">   27</span>&#160;        });</div>
+<div class="line"><a name="l00028"></a><span class="lineno">   28</span>&#160;    Kokkos::fence();</div>
+<div class="line"><a name="l00029"></a><span class="lineno">   29</span>&#160; </div>
+<div class="line"><a name="l00030"></a><span class="lineno">   30</span>&#160;    <span class="keywordflow">return</span> <span class="keyword">true</span>;    </div>
+<div class="line"><a name="l00031"></a><span class="lineno">   31</span>&#160;}</div>
+<div class="line"><a name="l00032"></a><span class="lineno">   32</span>&#160; </div>
+<div class="line"><a name="l00033"></a><span class="lineno">   33</span>&#160;<span class="keyword">inline</span></div>
+<div class="line"><a name="l00034"></a><span class="lineno">   34</span>&#160;<span class="keywordtype">bool</span> <a class="code" href="namespacepFlow_1_1AB2Kernels.html#a0e684a0c67df0388c9ab00a8abea55c4">intScattered</a></div>
+<div class="line"><a name="l00035"></a><span class="lineno"><a class="line" href="namespacepFlow_1_1AB2Kernels.html#a0e684a0c67df0388c9ab00a8abea55c4">   35</a></span>&#160;(</div>
+<div class="line"><a name="l00036"></a><span class="lineno">   36</span>&#160;    <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">word</a>&amp; name,</div>
+<div class="line"><a name="l00037"></a><span class="lineno">   37</span>&#160;    <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
+<div class="line"><a name="l00038"></a><span class="lineno">   38</span>&#160;    <span class="keyword">const</span> <a class="code" href="classpFlow_1_1pointFlag.html">pFlagTypeDevice</a>&amp; activePoints,</div>
+<div class="line"><a name="l00039"></a><span class="lineno">   39</span>&#160;    <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#aa5276597d4016d6696f1f265a13d2164">deviceViewType1D&lt;realx3&gt;</a>&amp; y, </div>
+<div class="line"><a name="l00040"></a><span class="lineno">   40</span>&#160;    <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#aa5276597d4016d6696f1f265a13d2164">deviceViewType1D&lt;realx3&gt;</a>&amp; dy,</div>
+<div class="line"><a name="l00041"></a><span class="lineno">   41</span>&#160;    <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#aa5276597d4016d6696f1f265a13d2164">deviceViewType1D&lt;realx3&gt;</a>&amp; dy1</div>
+<div class="line"><a name="l00042"></a><span class="lineno">   42</span>&#160;)</div>
+<div class="line"><a name="l00043"></a><span class="lineno">   43</span>&#160;{</div>
+<div class="line"><a name="l00044"></a><span class="lineno">   44</span>&#160; </div>
+<div class="line"><a name="l00045"></a><span class="lineno">   45</span>&#160;    Kokkos::parallel_for(</div>
+<div class="line"><a name="l00046"></a><span class="lineno">   46</span>&#160;        name,</div>
+<div class="line"><a name="l00047"></a><span class="lineno">   47</span>&#160;        <a class="code" href="namespacepFlow.html#a6ea32be3339f3023ab349c9c3775c916">deviceRPolicyStatic</a> (activePoints.<a class="code" href="classpFlow_1_1pointFlag.html#a766f5bcd312f3e0ca10011181b05f318">activeRange</a>().start(), activePoints.<a class="code" href="classpFlow_1_1pointFlag.html#a766f5bcd312f3e0ca10011181b05f318">activeRange</a>().end()),</div>
+<div class="line"><a name="l00048"></a><span class="lineno">   48</span>&#160;        <a class="code" href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a>(<a class="code" href="namespacepFlow.html#abd01e8e67e3d94cab04ecaaf4f85ac1b">uint32</a> i){</div>
+<div class="line"><a name="l00049"></a><span class="lineno">   49</span>&#160;            <span class="keywordflow">if</span>( activePoints(i))</div>
+<div class="line"><a name="l00050"></a><span class="lineno">   50</span>&#160;            {</div>
+<div class="line"><a name="l00051"></a><span class="lineno">   51</span>&#160;                y[i] +=  dt*(<span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(1.5) * dy[i] - <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(0.5) * dy1[i]);</div>
+<div class="line"><a name="l00052"></a><span class="lineno">   52</span>&#160;                dy1[i] = dy[i];</div>
+<div class="line"><a name="l00053"></a><span class="lineno">   53</span>&#160;            }</div>
+<div class="line"><a name="l00054"></a><span class="lineno">   54</span>&#160;        });</div>
+<div class="line"><a name="l00055"></a><span class="lineno">   55</span>&#160;    Kokkos::fence();</div>
+<div class="line"><a name="l00056"></a><span class="lineno">   56</span>&#160; </div>
+<div class="line"><a name="l00057"></a><span class="lineno">   57</span>&#160; </div>
+<div class="line"><a name="l00058"></a><span class="lineno">   58</span>&#160;    <span class="keywordflow">return</span> <span class="keyword">true</span>;</div>
+<div class="line"><a name="l00059"></a><span class="lineno">   59</span>&#160;}</div>
+<div class="line"><a name="l00060"></a><span class="lineno">   60</span>&#160; </div>
+<div class="line"><a name="l00061"></a><span class="lineno">   61</span>&#160;}</div>
+<div class="line"><a name="l00062"></a><span class="lineno">   62</span>&#160; </div>
+<div class="line"><a name="l00063"></a><span class="lineno">   63</span>&#160;<span class="preprocessor">#endif</span></div>
+</div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
+<div class="ttc" id="anamespacepFlow_html_a6192191c0e9c178a44ee1ac350fde476"><div class="ttname"><a href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">pFlow::real</a></div><div class="ttdeci">float real</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00045">builtinTypes.hpp:45</a></div></div>
+<div class="ttc" id="atypes_8hpp_html"><div class="ttname"><a href="types_8hpp.html">types.hpp</a></div></div>
+<div class="ttc" id="astructpFlow_1_1Range_html_a38ebf09d6bfa7f04d4a95ff7f0d3aef4"><div class="ttname"><a href="structpFlow_1_1Range.html#a38ebf09d6bfa7f04d4a95ff7f0d3aef4">pFlow::Range::end</a></div><div class="ttdeci">INLINE_FUNCTION_HD T &amp; end()</div><div class="ttdoc">End.</div><div class="ttdef"><b>Definition:</b> <a href="Range_8hpp_source.html#l00101">Range.hpp:101</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_abd01e8e67e3d94cab04ecaaf4f85ac1b"><div class="ttname"><a href="namespacepFlow.html#abd01e8e67e3d94cab04ecaaf4f85ac1b">pFlow::uint32</a></div><div class="ttdeci">unsigned int uint32</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00056">builtinTypes.hpp:56</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00064">builtinTypes.hpp:64</a></div></div>
+<div class="ttc" id="astructpFlow_1_1Range_html_a8ade4cd349991c4c7ed9131410ddd8f0"><div class="ttname"><a href="structpFlow_1_1Range.html#a8ade4cd349991c4c7ed9131410ddd8f0">pFlow::Range::start</a></div><div class="ttdeci">INLINE_FUNCTION_HD T &amp; start()</div><div class="ttdoc">Start.</div><div class="ttdef"><b>Definition:</b> <a href="Range_8hpp_source.html#l00094">Range.hpp:94</a></div></div>
+<div class="ttc" id="aKokkosTypes_8hpp_html"><div class="ttname"><a href="KokkosTypes_8hpp.html">KokkosTypes.hpp</a></div></div>
+<div class="ttc" id="anamespacepFlow_1_1AB2Kernels_html"><div class="ttname"><a href="namespacepFlow_1_1AB2Kernels.html">pFlow::AB2Kernels</a></div><div class="ttdef"><b>Definition:</b> <a href="AB2Kernels_8hpp_source.html#l00009">AB2Kernels.hpp:9</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_aa5276597d4016d6696f1f265a13d2164"><div class="ttname"><a href="namespacepFlow.html#aa5276597d4016d6696f1f265a13d2164">pFlow::deviceViewType1D</a></div><div class="ttdeci">Kokkos::View&lt; T * &gt; deviceViewType1D</div><div class="ttdoc">1D array (vector) with default device (memory space and execution space)</div><div class="ttdef"><b>Definition:</b> <a href="KokkosTypes_8hpp_source.html#l00121">KokkosTypes.hpp:121</a></div></div>
+<div class="ttc" id="anamespacepFlow_1_1AB2Kernels_html_a1d3752d19417e5f211093381ef34cbc9"><div class="ttname"><a href="namespacepFlow_1_1AB2Kernels.html#a1d3752d19417e5f211093381ef34cbc9">pFlow::AB2Kernels::intAllActive</a></div><div class="ttdeci">bool intAllActive(const word &amp;name, real dt, rangeU32 activeRng, const deviceViewType1D&lt; realx3 &gt; &amp;y, const deviceViewType1D&lt; realx3 &gt; &amp;dy, const deviceViewType1D&lt; realx3 &gt; &amp;dy1)</div><div class="ttdef"><b>Definition:</b> <a href="AB2Kernels_8hpp_source.html#l00012">AB2Kernels.hpp:12</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointFlag_html_a766f5bcd312f3e0ca10011181b05f318"><div class="ttname"><a href="classpFlow_1_1pointFlag.html#a766f5bcd312f3e0ca10011181b05f318">pFlow::pointFlag::activeRange</a></div><div class="ttdeci">const INLINE_FUNCTION_HD auto &amp; activeRange() const</div><div class="ttdef"><b>Definition:</b> <a href="pointFlag_8hpp_source.html#l00179">pointFlag.hpp:179</a></div></div>
+<div class="ttc" id="astructpFlow_1_1Range_html"><div class="ttname"><a href="structpFlow_1_1Range.html">pFlow::Range&lt; uint32 &gt;</a></div></div>
+<div class="ttc" id="anamespacepFlow_1_1AB2Kernels_html_a0e684a0c67df0388c9ab00a8abea55c4"><div class="ttname"><a href="namespacepFlow_1_1AB2Kernels.html#a0e684a0c67df0388c9ab00a8abea55c4">pFlow::AB2Kernels::intScattered</a></div><div class="ttdeci">bool intScattered(const word &amp;name, real dt, const pFlagTypeDevice &amp;activePoints, const deviceViewType1D&lt; realx3 &gt; &amp;y, const deviceViewType1D&lt; realx3 &gt; &amp;dy, const deviceViewType1D&lt; realx3 &gt; &amp;dy1)</div><div class="ttdef"><b>Definition:</b> <a href="AB2Kernels_8hpp_source.html#l00035">AB2Kernels.hpp:35</a></div></div>
+<div class="ttc" id="apFlowMacros_8hpp_html_aa7d4742cdf24a3792276e669531d145c"><div class="ttname"><a href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a></div><div class="ttdeci">#define LAMBDA_HD</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00058">pFlowMacros.hpp:58</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a6ea32be3339f3023ab349c9c3775c916"><div class="ttname"><a href="namespacepFlow.html#a6ea32be3339f3023ab349c9c3775c916">pFlow::deviceRPolicyStatic</a></div><div class="ttdeci">Kokkos::RangePolicy&lt; Kokkos::DefaultExecutionSpace, Kokkos::Schedule&lt; Kokkos::Static &gt;, Kokkos::IndexType&lt; pFlow::uint32 &gt; &gt; deviceRPolicyStatic</div><div class="ttdef"><b>Definition:</b> <a href="KokkosTypes_8hpp_source.html#l00066">KokkosTypes.hpp:66</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointFlag_html"><div class="ttname"><a href="classpFlow_1_1pointFlag.html">pFlow::pointFlag&lt; DefaultExecutionSpace &gt;</a></div></div>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_68267d1309a1af8e8297ef4c3efbcdba.html">src</a></li><li class="navelem"><a class="el" href="dir_5ff0557589c78f704a7131791f9a8bc6.html">Integration</a></li><li class="navelem"><a class="el" href="dir_eb84e0c9bccf6469316a77378e4a6fe1.html">AdamsBashforth2</a></li><li class="navelem"><a class="el" href="AB2Kernels_8hpp.html">AB2Kernels.hpp</a></li>
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+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="namespaces"></a>
+Namespaces</h2></td></tr>
+<tr class="memitem:namespacepFlow"><td class="memItemLeft" align="right" valign="top"> &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepFlow.html">pFlow</a></td></tr>
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+Typedefs</h2></td></tr>
+<tr class="memitem:a42ff9b272180d6b5b128aafacd50a411"><td class="memItemLeft" align="right" valign="top">using&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepFlow.html#a42ff9b272180d6b5b128aafacd50a411">rpIntegration</a> = Kokkos::RangePolicy&lt; DefaultExecutionSpace, Kokkos::Schedule&lt; Kokkos::Static &gt;, Kokkos::IndexType&lt; uint32 &gt; &gt;</td></tr>
+<tr class="memdesc:a42ff9b272180d6b5b128aafacd50a411"><td class="mdescLeft">&#160;</td><td class="mdescRight"><a class="el" href="structpFlow_1_1Range.html" title="Range for elements in an vector [start,end)">Range</a> policy for integration kernel (alias)  <a href="namespacepFlow.html#a42ff9b272180d6b5b128aafacd50a411">More...</a><br /></td></tr>
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+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="func-members"></a>
+Functions</h2></td></tr>
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doc/code-documentation/html/AdamsBashforth2_8cpp.js

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+var AdamsBashforth2_8cpp =
+[
+    [ "rpIntegration", "AdamsBashforth2_8cpp.html#a42ff9b272180d6b5b128aafacd50a411", null ],
+    [ "intAllActive", "AdamsBashforth2_8cpp.html#ad07d1cb3572f2d482cdf0e9f2868071b", null ],
+    [ "intScattered", "AdamsBashforth2_8cpp.html#a19c4c4ae40e7e332c50f85bcf8fb93d9", null ]
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+<div class="line"><a name="l00072"></a><span class="lineno">   72</span>&#160;    <span class="keyword">auto</span> activeRng  = dy1.<a class="code" href="classpFlow_1_1pointField.html#afef304b4d4497e45857f6edef9b049e6">activeRange</a>();</div>
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+<div class="line"><a name="l00074"></a><span class="lineno">   74</span>&#160; </div>
+<div class="line"><a name="l00075"></a><span class="lineno">   75</span>&#160;    Kokkos::parallel_for(</div>
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+<div class="line"><a name="l00086"></a><span class="lineno">   86</span>&#160; </div>
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+<div class="line"><a name="l00162"></a><span class="lineno">  162</span>&#160; </div>
+<div class="line"><a name="l00163"></a><span class="lineno">  163</span>&#160;}</div>
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+<div class="line"><a name="l00166"></a><span class="lineno">  166</span>&#160;    <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
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+<div class="line"><a name="l00187"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth2.html#ad114a4a04b76ea8e10d4388756912a7e">  187</a></span>&#160;<span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#ad114a4a04b76ea8e10d4388756912a7e">pFlow::AdamsBashforth2::setInitialVals</a>(</div>
+<div class="line"><a name="l00188"></a><span class="lineno">  188</span>&#160;    <span class="keyword">const</span> <a class="code" href="classpFlow_1_1indexContainer.html">int32IndexContainer</a>&amp; newIndices,</div>
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+<div class="line"><a name="l00193"></a><span class="lineno">  193</span>&#160; </div>
 </div><!-- fragment --></div><!-- contents -->
 </div><!-- doc-content -->
-<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_ac755e4bf02c3732d1eb89de9e903ebdb"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#ac755e4bf02c3732d1eb89de9e903ebdb">pFlow::AdamsBashforth2::correct</a></div><div class="ttdeci">bool correct(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy) override</div><div class="ttdoc">Correction/main integration step.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00059">AdamsBashforth2.cpp:59</a></div></div>
-<div class="ttc" id="anamespacepFlow_html_a6192191c0e9c178a44ee1ac350fde476"><div class="ttname"><a href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">pFlow::real</a></div><div class="ttdeci">float real</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00046">builtinTypes.hpp:46</a></div></div>
-<div class="ttc" id="anamespacepFlow_html_a304d8581876270871949bf5d4755036a"><div class="ttname"><a href="namespacepFlow.html#a304d8581876270871949bf5d4755036a">pFlow::range</a></div><div class="ttdeci">kRange&lt; int &gt; range</div><div class="ttdef"><b>Definition:</b> <a href="KokkosTypes_8hpp_source.html#l00059">KokkosTypes.hpp:59</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a5595208ecd7c3d8fdc960c8d2fd9bb69"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a5595208ecd7c3d8fdc960c8d2fd9bb69">pFlow::AdamsBashforth2::predict</a></div><div class="ttdeci">bool predict(real UNUSED(dt), realx3PointField_D &amp;UNUSED(y), realx3PointField_D &amp;UNUSED(dy)) final</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00123">AdamsBashforth2.cpp:123</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a6192191c0e9c178a44ee1ac350fde476"><div class="ttname"><a href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">pFlow::real</a></div><div class="ttdeci">float real</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00045">builtinTypes.hpp:45</a></div></div>
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-<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00063">builtinTypes.hpp:63</a></div></div>
-<div class="ttc" id="anamespacepFlow_html_a477d522d35403bd985ae105bd759e9d1"><div class="ttname"><a href="namespacepFlow.html#a477d522d35403bd985ae105bd759e9d1">pFlow::zero3</a></div><div class="ttdeci">const realx3 zero3(0.0)</div><div class="ttdef"><b>Definition:</b> <a href="types_8hpp_source.html#l00097">types.hpp:97</a></div></div>
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-<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a8da2088458d635dfa1fbe1823a3bfd6d"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a8da2088458d635dfa1fbe1823a3bfd6d">pFlow::AdamsBashforth2::setInitialVals</a></div><div class="ttdeci">bool setInitialVals(const int32IndexContainer &amp;newIndices, const realx3Vector &amp;y) override</div><div class="ttdoc">Set the initial values for new indices.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00077">AdamsBashforth2.cpp:77</a></div></div>
-<div class="ttc" id="anamespacepFlow_html_a16a2137651b2c6b8ea4a8daf1d89ff61"><div class="ttname"><a href="namespacepFlow.html#a16a2137651b2c6b8ea4a8daf1d89ff61">pFlow::baseName</a></div><div class="ttdeci">word baseName(const word &amp;w, char sep='.')</div><div class="ttdef"><b>Definition:</b> <a href="bTypesFunctions_8cpp_source.html#l00156">bTypesFunctions.cpp:156</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1integration_html"><div class="ttname"><a href="classpFlow_1_1integration.html">pFlow::integration</a></div><div class="ttdoc">Base class for integrating the first order ODE (IVP)</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00051">integration.hpp:51</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_abd01e8e67e3d94cab04ecaaf4f85ac1b"><div class="ttname"><a href="namespacepFlow.html#abd01e8e67e3d94cab04ecaaf4f85ac1b">pFlow::uint32</a></div><div class="ttdeci">unsigned int uint32</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00056">builtinTypes.hpp:56</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a1e7473dc6951c5718277fadf484d4c7d"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a1e7473dc6951c5718277fadf484d4c7d">pFlow::AdamsBashforth2::AdamsBashforth2</a></div><div class="ttdeci">AdamsBashforth2(const word &amp;baseName, pointStructure &amp;pStruct, const word &amp;method, const realx3Field_D &amp;initialValField)</div><div class="ttdoc">Construct from components.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00094">AdamsBashforth2.cpp:94</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00064">builtinTypes.hpp:64</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1internalField_html_a67d82cfcfc613c9ffbccd1f9a9aa0ce6"><div class="ttname"><a href="classpFlow_1_1internalField.html#a67d82cfcfc613c9ffbccd1f9a9aa0ce6">pFlow::internalField::activePointsMaskDevice</a></div><div class="ttdeci">const pFlagTypeDevice &amp; activePointsMaskDevice() const</div><div class="ttdef"><b>Definition:</b> <a href="internalField_8hpp_source.html#l00120">internalField.hpp:120</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_af547b8e736ebac3297672aff612d426a"><div class="ttname"><a href="namespacepFlow.html#af547b8e736ebac3297672aff612d426a">pFlow::realx3PointField_D</a></div><div class="ttdeci">pointField_D&lt; realx3 &gt; realx3PointField_D</div><div class="ttdef"><b>Definition:</b> <a href="pointFields_8hpp_source.html#l00052">pointFields.hpp:52</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a477d522d35403bd985ae105bd759e9d1"><div class="ttname"><a href="namespacepFlow.html#a477d522d35403bd985ae105bd759e9d1">pFlow::zero3</a></div><div class="ttdeci">const realx3 zero3(0.0)</div><div class="ttdef"><b>Definition:</b> <a href="types_8hpp_source.html#l00137">types.hpp:137</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_aa3a14d3c76643399fc4edd8eca14944a"><div class="ttname"><a href="namespacepFlow.html#aa3a14d3c76643399fc4edd8eca14944a">pFlow::DefaultExecutionSpace</a></div><div class="ttdeci">Kokkos::DefaultExecutionSpace DefaultExecutionSpace</div><div class="ttdoc">Default execution space, it can be device exe.</div><div class="ttdef"><b>Definition:</b> <a href="KokkosTypes_8hpp_source.html#l00061">KokkosTypes.hpp:61</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_ad07d1cb3572f2d482cdf0e9f2868071b"><div class="ttname"><a href="namespacepFlow.html#ad07d1cb3572f2d482cdf0e9f2868071b">pFlow::intAllActive</a></div><div class="ttdeci">bool intAllActive(real dt, realx3Field_D &amp;y, realx3PointField_D &amp;dy, realx3PointField_D &amp;dy1)</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00036">AdamsBashforth2.cpp:36</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1Field_html"><div class="ttname"><a href="classpFlow_1_1Field.html">pFlow::Field&lt; realx3 &gt;</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a31ed4ecb323de5dc3f004927060fdc45"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a31ed4ecb323de5dc3f004927060fdc45">pFlow::AdamsBashforth2::correct</a></div><div class="ttdeci">bool correct(real dt, realx3PointField_D &amp;y, realx3PointField_D &amp;dy) final</div><div class="ttdoc">Correction/main integration step.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00142">AdamsBashforth2.cpp:142</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a19c4c4ae40e7e332c50f85bcf8fb93d9"><div class="ttname"><a href="namespacepFlow.html#a19c4c4ae40e7e332c50f85bcf8fb93d9">pFlow::intScattered</a></div><div class="ttdeci">bool intScattered(real dt, realx3Field_D &amp;y, realx3PointField_D &amp;dy, realx3PointField_D &amp;dy1)</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00061">AdamsBashforth2.cpp:61</a></div></div>
+<div class="ttc" id="anamespacepFlow_html"><div class="ttname"><a href="namespacepFlow.html">pFlow</a></div><div class="ttdef"><b>Definition:</b> <a href="demGeometry_8hpp_source.html#l00027">demGeometry.hpp:27</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1VectorSingle_html_a1fabd2a58aae204d5639f041216f54da"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html#a1fabd2a58aae204d5639f041216f54da">pFlow::VectorSingle::deviceView</a></div><div class="ttdeci">INLINE_FUNCTION_H auto deviceView() const</div><div class="ttdoc">Device view range [0, size)</div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8cpp_source.html#l00263">VectorSingle.cpp:263</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a16a2137651b2c6b8ea4a8daf1d89ff61"><div class="ttname"><a href="namespacepFlow.html#a16a2137651b2c6b8ea4a8daf1d89ff61">pFlow::baseName</a></div><div class="ttdeci">word baseName(const word &amp;w, char sep='.')</div><div class="ttdoc">Find the base in a group separated by &quot;.&quot; and return it.</div><div class="ttdef"><b>Definition:</b> <a href="bTypesFunctions_8cpp_source.html#l00185">bTypesFunctions.cpp:185</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointField_html"><div class="ttname"><a href="classpFlow_1_1pointField.html">pFlow::pointField</a></div><div class="ttdef"><b>Definition:</b> <a href="pointField_8hpp_source.html#l00033">pointField.hpp:33</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1objectFile_html"><div class="ttname"><a href="classpFlow_1_1objectFile.html">pFlow::objectFile</a></div><div class="ttdef"><b>Definition:</b> <a href="objectFile_8hpp_source.html#l00030">objectFile.hpp:30</a></div></div>
 <div class="ttc" id="aAdamsBashforth2_8hpp_html"><div class="ttname"><a href="AdamsBashforth2_8hpp.html">AdamsBashforth2.hpp</a></div></div>
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+<div class="ttc" id="avocabs_8hpp_html"><div class="ttname"><a href="vocabs_8hpp.html">vocabs.hpp</a></div></div>
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+<div class="line"><a name="l00044"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth2.html#aac898ef26b84e559b552fb63b187e4a3">   44</a></span>&#160;    <a class="code" href="classpFlow_1_1boundaryIntegrationList.html">boundaryIntegrationList</a> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#aac898ef26b84e559b552fb63b187e4a3">boundaryList_</a>;</div>
 <div class="line"><a name="l00045"></a><span class="lineno">   45</span>&#160; </div>
-<div class="line"><a name="l00047"></a><span class="lineno">   47</span>&#160;    <span class="keyword">using</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#ace46ff4fbe3c001c816dbc4f9f67606f">rpIntegration</a> = Kokkos::RangePolicy&lt;</div>
-<div class="line"><a name="l00048"></a><span class="lineno">   48</span>&#160;            <a class="code" href="namespacepFlow.html#aa3a14d3c76643399fc4edd8eca14944a">DefaultExecutionSpace</a>,</div>
-<div class="line"><a name="l00049"></a><span class="lineno">   49</span>&#160;            Kokkos::Schedule&lt;Kokkos::Static&gt;,</div>
-<div class="line"><a name="l00050"></a><span class="lineno">   50</span>&#160;            Kokkos::IndexType&lt;int32&gt;</div>
-<div class="line"><a name="l00051"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth2.html#ace46ff4fbe3c001c816dbc4f9f67606f">   51</a></span>&#160;            &gt;;</div>
+<div class="line"><a name="l00046"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth2.html#acfc416287e9f31450d930160b1ccaef3">   46</a></span>&#160;    <span class="keyword">friend</span> <span class="keyword">class </span><a class="code" href="classpFlow_1_1AdamsBashforth2.html#acfc416287e9f31450d930160b1ccaef3">processorAB2BoundaryIntegration</a>;</div>
+<div class="line"><a name="l00047"></a><span class="lineno">   47</span>&#160; </div>
+<div class="line"><a name="l00048"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth2.html#aec90bedeff0a2a031a0d310526a33f3b">   48</a></span>&#160;    <span class="keyword">const</span> <span class="keyword">auto</span>&amp; <a class="code" href="classpFlow_1_1AdamsBashforth2.html#aec90bedeff0a2a031a0d310526a33f3b">dy1</a>()<span class="keyword">const</span></div>
+<div class="line"><a name="l00049"></a><span class="lineno">   49</span>&#160;<span class="keyword">    </span>{</div>
+<div class="line"><a name="l00050"></a><span class="lineno">   50</span>&#160;        <span class="keywordflow">return</span> <span class="keyword">static_cast&lt;</span><span class="keyword">const </span><a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&amp;<span class="keyword">&gt;</span>(*this);</div>
+<div class="line"><a name="l00051"></a><span class="lineno">   51</span>&#160;    }</div>
 <div class="line"><a name="l00052"></a><span class="lineno">   52</span>&#160; </div>
-<div class="line"><a name="l00053"></a><span class="lineno">   53</span>&#160;<span class="keyword">public</span>:</div>
-<div class="line"><a name="l00054"></a><span class="lineno">   54</span>&#160; </div>
-<div class="line"><a name="l00056"></a><span class="lineno">   56</span>&#160;    <a class="code" href="classpFlow_1_1AdamsBashforth2.html#af1bd37f05c0a6093752c49fcaf0f82b1">TypeInfo</a>(<span class="stringliteral">&quot;AdamsBashforth2&quot;</span>);</div>
+<div class="line"><a name="l00053"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth2.html#a08830f3ac97ae61ab7971024f5bfc99f">   53</a></span>&#160;    <span class="keyword">auto</span>&amp; <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a08830f3ac97ae61ab7971024f5bfc99f">dy1</a>()</div>
+<div class="line"><a name="l00054"></a><span class="lineno">   54</span>&#160;    {</div>
+<div class="line"><a name="l00055"></a><span class="lineno">   55</span>&#160;        <span class="keywordflow">return</span> <span class="keyword">static_cast&lt;</span><a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&amp;<span class="keyword">&gt;</span>(*this);</div>
+<div class="line"><a name="l00056"></a><span class="lineno">   56</span>&#160;    }</div>
 <div class="line"><a name="l00057"></a><span class="lineno">   57</span>&#160;    </div>
-<div class="line"><a name="l00058"></a><span class="lineno">   58</span>&#160;    <span class="comment">// - Constructors</span></div>
+<div class="line"><a name="l00058"></a><span class="lineno">   58</span>&#160;<span class="keyword">public</span>:</div>
 <div class="line"><a name="l00059"></a><span class="lineno">   59</span>&#160; </div>
-<div class="line"><a name="l00061"></a><span class="lineno">   61</span>&#160;        <a class="code" href="classpFlow_1_1AdamsBashforth2.html#af6c1981009eb42d2e97eea2ec46cbac1">AdamsBashforth2</a>(</div>
-<div class="line"><a name="l00062"></a><span class="lineno">   62</span>&#160;            <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">word</a>&amp; <a class="code" href="classpFlow_1_1integration.html#a4e30df3927ef1cdd2490cd85018518f5">baseName</a>,</div>
-<div class="line"><a name="l00063"></a><span class="lineno">   63</span>&#160;            <a class="code" href="classpFlow_1_1repository.html">repository</a>&amp; <a class="code" href="classpFlow_1_1integration.html#a10329e18307a60d3fdb203bcbed2b295">owner</a>,</div>
-<div class="line"><a name="l00064"></a><span class="lineno">   64</span>&#160;            <span class="keyword">const</span> <a class="code" href="classpFlow_1_1pointStructure.html">pointStructure</a>&amp; <a class="code" href="classpFlow_1_1integration.html#a5a622149e803f0fa292a95784c12a7b8">pStruct</a>,</div>
-<div class="line"><a name="l00065"></a><span class="lineno">   65</span>&#160;            <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">word</a>&amp; method);</div>
-<div class="line"><a name="l00066"></a><span class="lineno">   66</span>&#160; </div>
-<div class="line"><a name="l00067"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth2.html#a29f8a3197295f0ffa73d24bbacc6228c">   67</a></span>&#160;        <a class="code" href="classpFlow_1_1uniquePtr.html">uniquePtr&lt;integration&gt;</a> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a29f8a3197295f0ffa73d24bbacc6228c">clone</a>()<span class="keyword">const override</span></div>
-<div class="line"><a name="l00068"></a><span class="lineno">   68</span>&#160;<span class="keyword">        </span>{</div>
-<div class="line"><a name="l00069"></a><span class="lineno">   69</span>&#160;            <span class="keywordflow">return</span> makeUnique&lt;AdamsBashforth2&gt;(*<span class="keyword">this</span>);</div>
-<div class="line"><a name="l00070"></a><span class="lineno">   70</span>&#160;        }</div>
+<div class="line"><a name="l00061"></a><span class="lineno">   61</span>&#160;    <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a4db1a4db4a3c5af1dc7037acec0e40a9">ClassInfo</a>(<span class="stringliteral">&quot;AdamsBashforth2&quot;</span>);</div>
+<div class="line"><a name="l00062"></a><span class="lineno">   62</span>&#160; </div>
+<div class="line"><a name="l00063"></a><span class="lineno">   63</span>&#160;    <span class="comment">// - Constructors</span></div>
+<div class="line"><a name="l00064"></a><span class="lineno">   64</span>&#160; </div>
+<div class="line"><a name="l00066"></a><span class="lineno">   66</span>&#160;        <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a1e7473dc6951c5718277fadf484d4c7d">AdamsBashforth2</a>(</div>
+<div class="line"><a name="l00067"></a><span class="lineno">   67</span>&#160;            <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">word</a>&amp; <a class="code" href="classpFlow_1_1integration.html#a4e30df3927ef1cdd2490cd85018518f5">baseName</a>,</div>
+<div class="line"><a name="l00068"></a><span class="lineno">   68</span>&#160;            <a class="code" href="classpFlow_1_1pointStructure.html">pointStructure</a>&amp; <a class="code" href="classpFlow_1_1integration.html#a5a622149e803f0fa292a95784c12a7b8">pStruct</a>,</div>
+<div class="line"><a name="l00069"></a><span class="lineno">   69</span>&#160;            <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">word</a>&amp; <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a307a24e988c782099db9fc49291efe1e">method</a>,</div>
+<div class="line"><a name="l00070"></a><span class="lineno">   70</span>&#160;            <span class="keyword">const</span> <a class="code" href="classpFlow_1_1Field.html">realx3Field_D</a>&amp; initialValField);</div>
 <div class="line"><a name="l00071"></a><span class="lineno">   71</span>&#160; </div>
-<div class="line"><a name="l00073"></a><span class="lineno">   73</span>&#160;        <span class="keyword">virtual</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a2bc3925e09474b1a2c094668a16b9515">~AdamsBashforth2</a>()=<span class="keywordflow">default</span>;</div>
+<div class="line"><a name="l00073"></a><span class="lineno">   73</span>&#160;        <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a0e0f8a5b0250e97e857de7bd6a5e9731">~AdamsBashforth2</a>()final = default;</div>
 <div class="line"><a name="l00074"></a><span class="lineno">   74</span>&#160; </div>
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 <div class="line"><a name="l00077"></a><span class="lineno">   77</span>&#160;            <a class="code" href="classpFlow_1_1integration.html">integration</a>,</div>
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 <div class="line"><a name="l00081"></a><span class="lineno">   81</span>&#160; </div>
 <div class="line"><a name="l00082"></a><span class="lineno">   82</span>&#160;    <span class="comment">// - Methods</span></div>
 <div class="line"><a name="l00083"></a><span class="lineno">   83</span>&#160; </div>
-<div class="line"><a name="l00084"></a><span class="lineno">   84</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#afb1938bc6cfc199cbd70f224040d4afc">predict</a>(</div>
-<div class="line"><a name="l00085"></a><span class="lineno">   85</span>&#160;            <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(dt), </div>
-<div class="line"><a name="l00086"></a><span class="lineno">   86</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(y), </div>
-<div class="line"><a name="l00087"></a><span class="lineno">   87</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(dy)) <span class="keyword">override</span>;</div>
-<div class="line"><a name="l00088"></a><span class="lineno">   88</span>&#160; </div>
-<div class="line"><a name="l00089"></a><span class="lineno">   89</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#ac755e4bf02c3732d1eb89de9e903ebdb">correct</a>(</div>
-<div class="line"><a name="l00090"></a><span class="lineno">   90</span>&#160;            <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
-<div class="line"><a name="l00091"></a><span class="lineno">   91</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; y, </div>
-<div class="line"><a name="l00092"></a><span class="lineno">   92</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; dy) <span class="keyword">override</span>;</div>
-<div class="line"><a name="l00093"></a><span class="lineno">   93</span>&#160; </div>
-<div class="line"><a name="l00094"></a><span class="lineno">   94</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a8da2088458d635dfa1fbe1823a3bfd6d">setInitialVals</a>(</div>
-<div class="line"><a name="l00095"></a><span class="lineno">   95</span>&#160;            <span class="keyword">const</span> <a class="code" href="classpFlow_1_1indexContainer.html">int32IndexContainer</a>&amp; newIndices,</div>
-<div class="line"><a name="l00096"></a><span class="lineno">   96</span>&#160;            <span class="keyword">const</span> <a class="code" href="classpFlow_1_1Vector.html">realx3Vector</a>&amp; y) <span class="keyword">override</span>;</div>
-<div class="line"><a name="l00097"></a><span class="lineno">   97</span>&#160; </div>
-<div class="line"><a name="l00098"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth2.html#aceb0c803bb6e5c46a1695c4e5b6e641f">   98</a></span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#aceb0c803bb6e5c46a1695c4e5b6e641f">needSetInitialVals</a>()<span class="keyword">const override</span></div>
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-<div class="line"><a name="l00100"></a><span class="lineno">  100</span>&#160;            <span class="keywordflow">return</span> <span class="keyword">false</span>;</div>
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-<div class="line"><a name="l00102"></a><span class="lineno">  102</span>&#160;        </div>
-<div class="line"><a name="l00104"></a><span class="lineno">  104</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a152b752a6b7b37e70fa5e7c99a484783">intAll</a>(</div>
-<div class="line"><a name="l00105"></a><span class="lineno">  105</span>&#160;            <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
-<div class="line"><a name="l00106"></a><span class="lineno">  106</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; y, </div>
-<div class="line"><a name="l00107"></a><span class="lineno">  107</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; dy, </div>
-<div class="line"><a name="l00108"></a><span class="lineno">  108</span>&#160;            <a class="code" href="namespacepFlow.html#a304d8581876270871949bf5d4755036a">range</a> activeRng);</div>
-<div class="line"><a name="l00109"></a><span class="lineno">  109</span>&#160; </div>
-<div class="line"><a name="l00111"></a><span class="lineno">  111</span>&#160;        <span class="keyword">template</span>&lt;<span class="keyword">typename</span> activeFunctor&gt;</div>
-<div class="line"><a name="l00112"></a><span class="lineno">  112</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a191dc9197b587f09bb5ee7989b0ba43e">intRange</a>(</div>
-<div class="line"><a name="l00113"></a><span class="lineno">  113</span>&#160;            <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
-<div class="line"><a name="l00114"></a><span class="lineno">  114</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; y, </div>
-<div class="line"><a name="l00115"></a><span class="lineno">  115</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; dy, </div>
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-<div class="line"><a name="l00117"></a><span class="lineno">  117</span>&#160; </div>
-<div class="line"><a name="l00118"></a><span class="lineno">  118</span>&#160;};</div>
-<div class="line"><a name="l00119"></a><span class="lineno">  119</span>&#160; </div>
-<div class="line"><a name="l00120"></a><span class="lineno">  120</span>&#160;<span class="keyword">template</span>&lt;<span class="keyword">typename</span> activeFunctor&gt;</div>
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-<div class="line"><a name="l00126"></a><span class="lineno">  126</span>&#160;{</div>
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-<div class="line"><a name="l00130"></a><span class="lineno">  130</span>&#160;    <span class="keyword">auto</span> d_dy1= dy1_.deviceVectorAll();</div>
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+<div class="line"><a name="l00084"></a><span class="lineno">   84</span>&#160;        <span class="keywordtype">void</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#abd77556ae6ba5220c472e06b2ef2da31">updateBoundariesSlaveToMasterIfRequested</a>()override;</div>
+<div class="line"><a name="l00085"></a><span class="lineno">   85</span>&#160; </div>
+<div class="line"><a name="l00087"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth2.html#a307a24e988c782099db9fc49291efe1e">   87</a></span>&#160;        <a class="code" href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">word</a> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a307a24e988c782099db9fc49291efe1e">method</a>()<span class="keyword">const override</span></div>
+<div class="line"><a name="l00088"></a><span class="lineno">   88</span>&#160;<span class="keyword">        </span>{</div>
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+<div class="line"><a name="l00092"></a><span class="lineno">   92</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a5595208ecd7c3d8fdc960c8d2fd9bb69">predict</a>(</div>
+<div class="line"><a name="l00093"></a><span class="lineno">   93</span>&#160;            <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(dt), </div>
+<div class="line"><a name="l00094"></a><span class="lineno">   94</span>&#160;            <a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&amp; <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(y), </div>
+<div class="line"><a name="l00095"></a><span class="lineno">   95</span>&#160;            <a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&amp; <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(dy)) <span class="keyword">final</span>;</div>
+<div class="line"><a name="l00096"></a><span class="lineno">   96</span>&#160;        </div>
+<div class="line"><a name="l00097"></a><span class="lineno">   97</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a5595208ecd7c3d8fdc960c8d2fd9bb69">predict</a>(</div>
+<div class="line"><a name="l00098"></a><span class="lineno">   98</span>&#160;            <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
+<div class="line"><a name="l00099"></a><span class="lineno">   99</span>&#160;            <a class="code" href="classpFlow_1_1Field.html">realx3Field_D</a>&amp; y, </div>
+<div class="line"><a name="l00100"></a><span class="lineno">  100</span>&#160;            <a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&amp; dy) <span class="keyword">final</span>;</div>
+<div class="line"><a name="l00101"></a><span class="lineno">  101</span>&#160; </div>
+<div class="line"><a name="l00102"></a><span class="lineno">  102</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a31ed4ecb323de5dc3f004927060fdc45">correct</a>(</div>
+<div class="line"><a name="l00103"></a><span class="lineno">  103</span>&#160;            <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
+<div class="line"><a name="l00104"></a><span class="lineno">  104</span>&#160;            <a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&amp; y, </div>
+<div class="line"><a name="l00105"></a><span class="lineno">  105</span>&#160;            <a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&amp; dy) <span class="keyword">final</span>;</div>
+<div class="line"><a name="l00106"></a><span class="lineno">  106</span>&#160; </div>
+<div class="line"><a name="l00107"></a><span class="lineno">  107</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a2dfa8f3fb9e8b803ed22d20d63e2f094">correctPStruct</a>(</div>
+<div class="line"><a name="l00108"></a><span class="lineno">  108</span>&#160;            <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
+<div class="line"><a name="l00109"></a><span class="lineno">  109</span>&#160;            <a class="code" href="classpFlow_1_1pointStructure.html">pointStructure</a>&amp; <a class="code" href="classpFlow_1_1integration.html#a5a622149e803f0fa292a95784c12a7b8">pStruct</a>, </div>
+<div class="line"><a name="l00110"></a><span class="lineno">  110</span>&#160;            <a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&amp; vel) <span class="keyword">final</span>;</div>
+<div class="line"><a name="l00111"></a><span class="lineno">  111</span>&#160;            </div>
+<div class="line"><a name="l00112"></a><span class="lineno">  112</span>&#160;        </div>
+<div class="line"><a name="l00113"></a><span class="lineno">  113</span>&#160;        <span class="comment">/*bool hearChanges</span></div>
+<div class="line"><a name="l00114"></a><span class="lineno">  114</span>&#160;<span class="comment">        (</span></div>
+<div class="line"><a name="l00115"></a><span class="lineno">  115</span>&#160;<span class="comment">            real t,</span></div>
+<div class="line"><a name="l00116"></a><span class="lineno">  116</span>&#160;<span class="comment">            real dt,</span></div>
+<div class="line"><a name="l00117"></a><span class="lineno">  117</span>&#160;<span class="comment">            uint32 iter,</span></div>
+<div class="line"><a name="l00118"></a><span class="lineno">  118</span>&#160;<span class="comment">            const message&amp; msg, </span></div>
+<div class="line"><a name="l00119"></a><span class="lineno">  119</span>&#160;<span class="comment">            const anyList&amp; varList</span></div>
+<div class="line"><a name="l00120"></a><span class="lineno">  120</span>&#160;<span class="comment">        ) override;*/</span></div>
+<div class="line"><a name="l00121"></a><span class="lineno">  121</span>&#160; </div>
+<div class="line"><a name="l00122"></a><span class="lineno">  122</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#ad114a4a04b76ea8e10d4388756912a7e">setInitialVals</a>(</div>
+<div class="line"><a name="l00123"></a><span class="lineno">  123</span>&#160;            <span class="keyword">const</span> <a class="code" href="classpFlow_1_1indexContainer.html">int32IndexContainer</a>&amp; newIndices,</div>
+<div class="line"><a name="l00124"></a><span class="lineno">  124</span>&#160;            <span class="keyword">const</span> <a class="code" href="classpFlow_1_1Vector.html">realx3Vector</a>&amp; y) <span class="keyword">final</span>;</div>
+<div class="line"><a name="l00125"></a><span class="lineno">  125</span>&#160; </div>
+<div class="line"><a name="l00126"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth2.html#a5fd0dfea4bc213a1a941358d72bedde0">  126</a></span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a5fd0dfea4bc213a1a941358d72bedde0">needSetInitialVals</a>()const final</div>
+<div class="line"><a name="l00127"></a><span class="lineno">  127</span>&#160;        {</div>
+<div class="line"><a name="l00128"></a><span class="lineno">  128</span>&#160;            <span class="keywordflow">return</span> <span class="keyword">false</span>;</div>
+<div class="line"><a name="l00129"></a><span class="lineno">  129</span>&#160;        }</div>
+<div class="line"><a name="l00130"></a><span class="lineno">  130</span>&#160; </div>
+<div class="line"><a name="l00131"></a><span class="lineno">  131</span>&#160;};</div>
 <div class="line"><a name="l00132"></a><span class="lineno">  132</span>&#160; </div>
-<div class="line"><a name="l00133"></a><span class="lineno">  133</span>&#160;    Kokkos::parallel_for(</div>
-<div class="line"><a name="l00134"></a><span class="lineno">  134</span>&#160;        <span class="stringliteral">&quot;AdamsBashforth2::correct&quot;</span>,</div>
-<div class="line"><a name="l00135"></a><span class="lineno">  135</span>&#160;        <a class="code" href="classpFlow_1_1AdamsBashforth2.html#ace46ff4fbe3c001c816dbc4f9f67606f">rpIntegration</a> (activeRng.first, activeRng.second),</div>
-<div class="line"><a name="l00136"></a><span class="lineno">  136</span>&#160;        <a class="code" href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a>(<a class="code" href="namespacepFlow.html#aae6ad039f09c0676db11bd114136a3fa">int32</a> i){</div>
-<div class="line"><a name="l00137"></a><span class="lineno">  137</span>&#160;            <span class="keywordflow">if</span>( activeP(i))</div>
-<div class="line"><a name="l00138"></a><span class="lineno">  138</span>&#160;            {</div>
-<div class="line"><a name="l00139"></a><span class="lineno">  139</span>&#160;                d_y[i] +=  dt*(<span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(3.0 / 2.0) * d_dy[i] - <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(1.0 / 2.0) * d_dy1[i]);</div>
-<div class="line"><a name="l00140"></a><span class="lineno">  140</span>&#160;                d_dy1[i] = d_dy[i];</div>
-<div class="line"><a name="l00141"></a><span class="lineno">  141</span>&#160;            }</div>
-<div class="line"><a name="l00142"></a><span class="lineno">  142</span>&#160;        });</div>
-<div class="line"><a name="l00143"></a><span class="lineno">  143</span>&#160;    Kokkos::fence();</div>
-<div class="line"><a name="l00144"></a><span class="lineno">  144</span>&#160; </div>
-<div class="line"><a name="l00145"></a><span class="lineno">  145</span>&#160; </div>
-<div class="line"><a name="l00146"></a><span class="lineno">  146</span>&#160;    <span class="keywordflow">return</span> <span class="keyword">true</span>;</div>
-<div class="line"><a name="l00147"></a><span class="lineno">  147</span>&#160;}</div>
-<div class="line"><a name="l00148"></a><span class="lineno">  148</span>&#160; </div>
-<div class="line"><a name="l00149"></a><span class="lineno">  149</span>&#160;} <span class="comment">// pFlow</span></div>
-<div class="line"><a name="l00150"></a><span class="lineno">  150</span>&#160; </div>
-<div class="line"><a name="l00151"></a><span class="lineno">  151</span>&#160;<span class="preprocessor">#endif //__integration_hpp__</span></div>
+<div class="line"><a name="l00133"></a><span class="lineno">  133</span>&#160; </div>
+<div class="line"><a name="l00134"></a><span class="lineno">  134</span>&#160;} <span class="comment">// pFlow</span></div>
+<div class="line"><a name="l00135"></a><span class="lineno">  135</span>&#160; </div>
+<div class="line"><a name="l00136"></a><span class="lineno">  136</span>&#160;<span class="preprocessor">#endif //__integration_hpp__</span></div>
 </div><!-- fragment --></div><!-- contents -->
 </div><!-- doc-content -->
-<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_aceb0c803bb6e5c46a1695c4e5b6e641f"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#aceb0c803bb6e5c46a1695c4e5b6e641f">pFlow::AdamsBashforth2::needSetInitialVals</a></div><div class="ttdeci">bool needSetInitialVals() const override</div><div class="ttdoc">Check if the method requires any set initial vals.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8hpp_source.html#l00098">AdamsBashforth2.hpp:98</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a46c37b69200a2f4faef9c149a25bab60"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a46c37b69200a2f4faef9c149a25bab60">pFlow::AdamsBashforth2::dy1_</a></div><div class="ttdeci">realx3PointField_D &amp; dy1_</div><div class="ttdoc">dy at t-dt</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8hpp_source.html#l00044">AdamsBashforth2.hpp:44</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_ac755e4bf02c3732d1eb89de9e903ebdb"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#ac755e4bf02c3732d1eb89de9e903ebdb">pFlow::AdamsBashforth2::correct</a></div><div class="ttdeci">bool correct(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy) override</div><div class="ttdoc">Correction/main integration step.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00059">AdamsBashforth2.cpp:59</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a29f8a3197295f0ffa73d24bbacc6228c"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a29f8a3197295f0ffa73d24bbacc6228c">pFlow::AdamsBashforth2::clone</a></div><div class="ttdeci">uniquePtr&lt; integration &gt; clone() const override</div><div class="ttdoc">Polymorphic copy/cloning.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8hpp_source.html#l00067">AdamsBashforth2.hpp:67</a></div></div>
-<div class="ttc" id="anamespacepFlow_html_a6192191c0e9c178a44ee1ac350fde476"><div class="ttname"><a href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">pFlow::real</a></div><div class="ttdeci">float real</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00046">builtinTypes.hpp:46</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a191dc9197b587f09bb5ee7989b0ba43e"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a191dc9197b587f09bb5ee7989b0ba43e">pFlow::AdamsBashforth2::intRange</a></div><div class="ttdeci">bool intRange(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy, activeFunctor activeP)</div><div class="ttdoc">Integrate on active points in the active range.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8hpp_source.html#l00121">AdamsBashforth2.hpp:121</a></div></div>
-<div class="ttc" id="anamespacepFlow_html_a304d8581876270871949bf5d4755036a"><div class="ttname"><a href="namespacepFlow.html#a304d8581876270871949bf5d4755036a">pFlow::range</a></div><div class="ttdeci">kRange&lt; int &gt; range</div><div class="ttdef"><b>Definition:</b> <a href="KokkosTypes_8hpp_source.html#l00059">KokkosTypes.hpp:59</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a0e0f8a5b0250e97e857de7bd6a5e9731"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a0e0f8a5b0250e97e857de7bd6a5e9731">pFlow::AdamsBashforth2::~AdamsBashforth2</a></div><div class="ttdeci">~AdamsBashforth2() final=default</div><div class="ttdoc">Destructor.</div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a307a24e988c782099db9fc49291efe1e"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a307a24e988c782099db9fc49291efe1e">pFlow::AdamsBashforth2::method</a></div><div class="ttdeci">word method() const override</div><div class="ttdoc">return integration method</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8hpp_source.html#l00087">AdamsBashforth2.hpp:87</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a5595208ecd7c3d8fdc960c8d2fd9bb69"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a5595208ecd7c3d8fdc960c8d2fd9bb69">pFlow::AdamsBashforth2::predict</a></div><div class="ttdeci">bool predict(real UNUSED(dt), realx3PointField_D &amp;UNUSED(y), realx3PointField_D &amp;UNUSED(dy)) final</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00123">AdamsBashforth2.cpp:123</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a6192191c0e9c178a44ee1ac350fde476"><div class="ttname"><a href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">pFlow::real</a></div><div class="ttdeci">float real</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00045">builtinTypes.hpp:45</a></div></div>
 <div class="ttc" id="apFlowMacros_8hpp_html_a86d500a34c624c2cae56bc25a31b12f3"><div class="ttname"><a href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a></div><div class="ttdeci">#define UNUSED(x)</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00035">pFlowMacros.hpp:35</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a2bc3925e09474b1a2c094668a16b9515"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a2bc3925e09474b1a2c094668a16b9515">pFlow::AdamsBashforth2::~AdamsBashforth2</a></div><div class="ttdeci">virtual ~AdamsBashforth2()=default</div><div class="ttdoc">Destructor.</div></div>
-<div class="ttc" id="aclasspFlow_1_1integration_html"><div class="ttname"><a href="classpFlow_1_1integration.html">pFlow::integration</a></div><div class="ttdoc">Base class for integrating the first order ODE (IVP)</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00049">integration.hpp:49</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1integration_html_a5a622149e803f0fa292a95784c12a7b8"><div class="ttname"><a href="classpFlow_1_1integration.html#a5a622149e803f0fa292a95784c12a7b8">pFlow::integration::pStruct</a></div><div class="ttdeci">const auto &amp; pStruct() const</div><div class="ttdoc">Const ref to pointStructure.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00113">integration.hpp:113</a></div></div>
-<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00063">builtinTypes.hpp:63</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html"><div class="ttname"><a href="classpFlow_1_1integration.html">pFlow::integration</a></div><div class="ttdoc">Base class for integrating the first order ODE (IVP)</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00051">integration.hpp:51</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html_a5a622149e803f0fa292a95784c12a7b8"><div class="ttname"><a href="classpFlow_1_1integration.html#a5a622149e803f0fa292a95784c12a7b8">pFlow::integration::pStruct</a></div><div class="ttdeci">const auto &amp; pStruct() const</div><div class="ttdoc">Const ref to pointStructure.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00115">integration.hpp:115</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a1e7473dc6951c5718277fadf484d4c7d"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a1e7473dc6951c5718277fadf484d4c7d">pFlow::AdamsBashforth2::AdamsBashforth2</a></div><div class="ttdeci">AdamsBashforth2(const word &amp;baseName, pointStructure &amp;pStruct, const word &amp;method, const realx3Field_D &amp;initialValField)</div><div class="ttdoc">Construct from components.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00094">AdamsBashforth2.cpp:94</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00064">builtinTypes.hpp:64</a></div></div>
 <div class="ttc" id="apointFields_8hpp_html"><div class="ttname"><a href="pointFields_8hpp.html">pointFields.hpp</a></div></div>
-<div class="ttc" id="anamespacepFlow_html_aa3a14d3c76643399fc4edd8eca14944a"><div class="ttname"><a href="namespacepFlow.html#aa3a14d3c76643399fc4edd8eca14944a">pFlow::DefaultExecutionSpace</a></div><div class="ttdeci">Kokkos::DefaultExecutionSpace DefaultExecutionSpace</div><div class="ttdef"><b>Definition:</b> <a href="KokkosTypes_8hpp_source.html#l00049">KokkosTypes.hpp:49</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a8da2088458d635dfa1fbe1823a3bfd6d"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a8da2088458d635dfa1fbe1823a3bfd6d">pFlow::AdamsBashforth2::setInitialVals</a></div><div class="ttdeci">bool setInitialVals(const int32IndexContainer &amp;newIndices, const realx3Vector &amp;y) override</div><div class="ttdoc">Set the initial values for new indices.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00077">AdamsBashforth2.cpp:77</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1integration_html_a4e30df3927ef1cdd2490cd85018518f5"><div class="ttname"><a href="classpFlow_1_1integration.html#a4e30df3927ef1cdd2490cd85018518f5">pFlow::integration::baseName</a></div><div class="ttdeci">const word &amp; baseName() const</div><div class="ttdoc">Base name.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00120">integration.hpp:120</a></div></div>
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-<div class="ttc" id="aclasspFlow_1_1integration_html_a10329e18307a60d3fdb203bcbed2b295"><div class="ttname"><a href="classpFlow_1_1integration.html#a10329e18307a60d3fdb203bcbed2b295">pFlow::integration::owner</a></div><div class="ttdeci">repository &amp; owner()</div><div class="ttdoc">Ref to the owner repository.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00127">integration.hpp:127</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a4db1a4db4a3c5af1dc7037acec0e40a9"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a4db1a4db4a3c5af1dc7037acec0e40a9">pFlow::AdamsBashforth2::ClassInfo</a></div><div class="ttdeci">ClassInfo(&quot;AdamsBashforth2&quot;)</div><div class="ttdoc">Class info.</div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a08830f3ac97ae61ab7971024f5bfc99f"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a08830f3ac97ae61ab7971024f5bfc99f">pFlow::AdamsBashforth2::dy1</a></div><div class="ttdeci">auto &amp; dy1()</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8hpp_source.html#l00053">AdamsBashforth2.hpp:53</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1Field_html"><div class="ttname"><a href="classpFlow_1_1Field.html">pFlow::Field&lt; realx3 &gt;</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a5fd0dfea4bc213a1a941358d72bedde0"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a5fd0dfea4bc213a1a941358d72bedde0">pFlow::AdamsBashforth2::needSetInitialVals</a></div><div class="ttdeci">bool needSetInitialVals() const final</div><div class="ttdoc">Check if the method requires any set initial vals.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8hpp_source.html#l00126">AdamsBashforth2.hpp:126</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_aac898ef26b84e559b552fb63b187e4a3"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#aac898ef26b84e559b552fb63b187e4a3">pFlow::AdamsBashforth2::boundaryList_</a></div><div class="ttdeci">boundaryIntegrationList boundaryList_</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8hpp_source.html#l00044">AdamsBashforth2.hpp:44</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a31ed4ecb323de5dc3f004927060fdc45"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a31ed4ecb323de5dc3f004927060fdc45">pFlow::AdamsBashforth2::correct</a></div><div class="ttdeci">bool correct(real dt, realx3PointField_D &amp;y, realx3PointField_D &amp;dy) final</div><div class="ttdoc">Correction/main integration step.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00142">AdamsBashforth2.cpp:142</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html_a4e30df3927ef1cdd2490cd85018518f5"><div class="ttname"><a href="classpFlow_1_1integration.html#a4e30df3927ef1cdd2490cd85018518f5">pFlow::integration::baseName</a></div><div class="ttdeci">const word &amp; baseName() const</div><div class="ttdoc">Base name.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00122">integration.hpp:122</a></div></div>
+<div class="ttc" id="anamespacepFlow_html"><div class="ttname"><a href="namespacepFlow.html">pFlow</a></div><div class="ttdef"><b>Definition:</b> <a href="demGeometry_8hpp_source.html#l00027">demGeometry.hpp:27</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointField_html"><div class="ttname"><a href="classpFlow_1_1pointField.html">pFlow::pointField</a></div><div class="ttdef"><b>Definition:</b> <a href="pointField_8hpp_source.html#l00033">pointField.hpp:33</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointStructure_html"><div class="ttname"><a href="classpFlow_1_1pointStructure.html">pFlow::pointStructure</a></div><div class="ttdef"><b>Definition:</b> <a href="pointStructure_8hpp_source.html#l00034">pointStructure.hpp:34</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a2dfa8f3fb9e8b803ed22d20d63e2f094"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a2dfa8f3fb9e8b803ed22d20d63e2f094">pFlow::AdamsBashforth2::correctPStruct</a></div><div class="ttdeci">bool correctPStruct(real dt, pointStructure &amp;pStruct, realx3PointField_D &amp;vel) final</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00165">AdamsBashforth2.cpp:165</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_aec90bedeff0a2a031a0d310526a33f3b"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#aec90bedeff0a2a031a0d310526a33f3b">pFlow::AdamsBashforth2::dy1</a></div><div class="ttdeci">const auto &amp; dy1() const</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8hpp_source.html#l00048">AdamsBashforth2.hpp:48</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_acfc416287e9f31450d930160b1ccaef3"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#acfc416287e9f31450d930160b1ccaef3">pFlow::AdamsBashforth2::processorAB2BoundaryIntegration</a></div><div class="ttdeci">friend class processorAB2BoundaryIntegration</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8hpp_source.html#l00046">AdamsBashforth2.hpp:46</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_ad114a4a04b76ea8e10d4388756912a7e"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#ad114a4a04b76ea8e10d4388756912a7e">pFlow::AdamsBashforth2::setInitialVals</a></div><div class="ttdeci">bool setInitialVals(const int32IndexContainer &amp;newIndices, const realx3Vector &amp;y) final</div><div class="ttdoc">Set the initial values for new indices.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00187">AdamsBashforth2.cpp:187</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_abd77556ae6ba5220c472e06b2ef2da31"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#abd77556ae6ba5220c472e06b2ef2da31">pFlow::AdamsBashforth2::updateBoundariesSlaveToMasterIfRequested</a></div><div class="ttdeci">void updateBoundariesSlaveToMasterIfRequested() override</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00118">AdamsBashforth2.cpp:118</a></div></div>
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+<div class="ttc" id="aboundaryIntegrationList_8hpp_html"><div class="ttname"><a href="boundaryIntegrationList_8hpp.html">boundaryIntegrationList.hpp</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1integration_html"><div class="ttname"><a href="classpFlow_1_1integration.html">pFlow::integration</a></div><div class="ttdoc">Base class for integrating the first order ODE (IVP)</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00051">integration.hpp:51</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00064">builtinTypes.hpp:64</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a477d522d35403bd985ae105bd759e9d1"><div class="ttname"><a href="namespacepFlow.html#a477d522d35403bd985ae105bd759e9d1">pFlow::zero3</a></div><div class="ttdeci">const realx3 zero3(0.0)</div><div class="ttdef"><b>Definition:</b> <a href="types_8hpp_source.html#l00137">types.hpp:137</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_ac755e4bf02c3732d1eb89de9e903ebdb"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#ac755e4bf02c3732d1eb89de9e903ebdb">pFlow::AdamsBashforth3::correct</a></div><div class="ttdeci">bool correct(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy) override</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8cpp_source.html#l00060">AdamsBashforth3.cpp:60</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1pointField_html"><div class="ttname"><a href="classpFlow_1_1pointField.html">pFlow::pointField</a></div><div class="ttdef"><b>Definition:</b> <a href="pointField_8hpp_source.html#l00033">pointField.hpp:33</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointStructure_html"><div class="ttname"><a href="classpFlow_1_1pointStructure.html">pFlow::pointStructure</a></div><div class="ttdef"><b>Definition:</b> <a href="pointStructure_8hpp_source.html#l00034">pointStructure.hpp:34</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1VectorSingle_html"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html">pFlow::VectorSingle</a></div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8hpp_source.html#l00044">VectorSingle.hpp:44</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1objectFile_html"><div class="ttname"><a href="classpFlow_1_1objectFile.html">pFlow::objectFile</a></div><div class="ttdef"><b>Definition:</b> <a href="objectFile_8hpp_source.html#l00030">objectFile.hpp:30</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1VectorSingle_html_a51122b76468e0c5f19ea69c5c0ca6cf4"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">pFlow::VectorSingle::deviceViewAll</a></div><div class="ttdeci">INLINE_FUNCTION_H auto &amp; deviceViewAll()</div><div class="ttdoc">Device view range [0,capcity)</div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8cpp_source.html#l00249">VectorSingle.cpp:249</a></div></div>
+<div class="ttc" id="apFlowMacros_8hpp_html_aa7d4742cdf24a3792276e669531d145c"><div class="ttname"><a href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a></div><div class="ttdeci">#define LAMBDA_HD</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00058">pFlowMacros.hpp:58</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a12b4d93aa9730629403d73e84386bff5"><div class="ttname"><a href="namespacepFlow.html#a12b4d93aa9730629403d73e84386bff5">pFlow::groupNames</a></div><div class="ttdeci">word groupNames(const word &amp;bw, const word &amp;tw, char sep='.')</div><div class="ttdoc">Group words and output bw.tw.</div><div class="ttdef"><b>Definition:</b> <a href="bTypesFunctions_8cpp_source.html#l00179">bTypesFunctions.cpp:179</a></div></div>
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doc/code-documentation/html/AdamsBashforth3_8hpp.html

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+  Node1 -> Node2 [dir="back",color="midnightblue",fontsize="10",style="solid",fontname="Helvetica"];
+  Node2 [label="src/Integration/AdamsBashforth3\l/AdamsBashforth3.cpp",height=0.2,width=0.4,color="black", fillcolor="white", style="filled",URL="$AdamsBashforth3_8cpp.html",tooltip=" "];
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+<div class="line"><a name="l00166"></a><span class="lineno">  166</span>&#160;    <span class="keyword">auto</span> activeRng = activeP.activeRange();</div>
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 <div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_aaef6f6937fdab620942909e86c18cb3a"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#aaef6f6937fdab620942909e86c18cb3a">pFlow::AdamsBashforth3::~AdamsBashforth3</a></div><div class="ttdeci">virtual ~AdamsBashforth3()=default</div><div class="ttdoc">Destructor.</div></div>
-<div class="ttc" id="anamespacepFlow_html_aa3a14d3c76643399fc4edd8eca14944a"><div class="ttname"><a href="namespacepFlow.html#aa3a14d3c76643399fc4edd8eca14944a">pFlow::DefaultExecutionSpace</a></div><div class="ttdeci">Kokkos::DefaultExecutionSpace DefaultExecutionSpace</div><div class="ttdef"><b>Definition:</b> <a href="KokkosTypes_8hpp_source.html#l00049">KokkosTypes.hpp:49</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_ac755e4bf02c3732d1eb89de9e903ebdb"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#ac755e4bf02c3732d1eb89de9e903ebdb">pFlow::AdamsBashforth3::correct</a></div><div class="ttdeci">bool correct(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy) override</div><div class="ttdoc">Correction/main integration step.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8cpp_source.html#l00060">AdamsBashforth3.cpp:60</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_aa3a14d3c76643399fc4edd8eca14944a"><div class="ttname"><a href="namespacepFlow.html#aa3a14d3c76643399fc4edd8eca14944a">pFlow::DefaultExecutionSpace</a></div><div class="ttdeci">Kokkos::DefaultExecutionSpace DefaultExecutionSpace</div><div class="ttdoc">Default execution space, it can be device exe.</div><div class="ttdef"><b>Definition:</b> <a href="KokkosTypes_8hpp_source.html#l00061">KokkosTypes.hpp:61</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_ac755e4bf02c3732d1eb89de9e903ebdb"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#ac755e4bf02c3732d1eb89de9e903ebdb">pFlow::AdamsBashforth3::correct</a></div><div class="ttdeci">bool correct(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy) override</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8cpp_source.html#l00060">AdamsBashforth3.cpp:60</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_a1f266356c0127865641500aea4aca002"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#a1f266356c0127865641500aea4aca002">pFlow::AdamsBashforth3::AdamsBashforth3</a></div><div class="ttdeci">AdamsBashforth3(const word &amp;baseName, repository &amp;owner, const pointStructure &amp;pStruct, const word &amp;method)</div><div class="ttdoc">Construct from components.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8cpp_source.html#l00026">AdamsBashforth3.cpp:26</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1token_html_a4aba281d025f1d580c3835d67656fd31ac08dae7edcb5c5bb959fee5971fbad95"><div class="ttname"><a href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31ac08dae7edcb5c5bb959fee5971fbad95">pFlow::token::SPACE</a></div><div class="ttdeci">@ SPACE</div><div class="ttdoc">Space [isspace].</div><div class="ttdef"><b>Definition:</b> <a href="token_8hpp_source.html#l00084">token.hpp:84</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1integration_html_a4e30df3927ef1cdd2490cd85018518f5"><div class="ttname"><a href="classpFlow_1_1integration.html#a4e30df3927ef1cdd2490cd85018518f5">pFlow::integration::baseName</a></div><div class="ttdeci">const word &amp; baseName() const</div><div class="ttdoc">Base name.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00120">integration.hpp:120</a></div></div>
-<div class="ttc" id="anamespacepFlow_html"><div class="ttname"><a href="namespacepFlow.html">pFlow</a></div><div class="ttdef"><b>Definition:</b> <a href="demComponent_8hpp_source.html#l00028">demComponent.hpp:28</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1token_html_a4aba281d025f1d580c3835d67656fd31ac08dae7edcb5c5bb959fee5971fbad95"><div class="ttname"><a href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31ac08dae7edcb5c5bb959fee5971fbad95">pFlow::token::SPACE</a></div><div class="ttdeci">@ SPACE</div><div class="ttdoc">Nul character.</div><div class="ttdef"><b>Definition:</b> <a href="token_8hpp_source.html#l00086">token.hpp:86</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html_a4e30df3927ef1cdd2490cd85018518f5"><div class="ttname"><a href="classpFlow_1_1integration.html#a4e30df3927ef1cdd2490cd85018518f5">pFlow::integration::baseName</a></div><div class="ttdeci">const word &amp; baseName() const</div><div class="ttdoc">Base name.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00122">integration.hpp:122</a></div></div>
+<div class="ttc" id="anamespacepFlow_html"><div class="ttname"><a href="namespacepFlow.html">pFlow</a></div><div class="ttdef"><b>Definition:</b> <a href="demGeometry_8hpp_source.html#l00027">demGeometry.hpp:27</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1IOstream_html_a367eb3425fc4e8270e2aa961df8ac8a5"><div class="ttname"><a href="classpFlow_1_1IOstream.html#a367eb3425fc4e8270e2aa961df8ac8a5">pFlow::IOstream::check</a></div><div class="ttdeci">virtual bool check(const char *operation) const</div><div class="ttdoc">Check IOstream status for given operation.</div><div class="ttdef"><b>Definition:</b> <a href="IOstream_8cpp_source.html#l00042">IOstream.cpp:42</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_a191dc9197b587f09bb5ee7989b0ba43e"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#a191dc9197b587f09bb5ee7989b0ba43e">pFlow::AdamsBashforth3::intRange</a></div><div class="ttdeci">bool intRange(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy, activeFunctor activeP)</div><div class="ttdoc">Integrate on active points in the active range.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00157">AdamsBashforth3.hpp:157</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1pointField_html"><div class="ttname"><a href="classpFlow_1_1pointField.html">pFlow::pointField</a></div><div class="ttdef"><b>Definition:</b> <a href="pointField_8hpp_source.html#l00035">pointField.hpp:35</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1pointStructure_html"><div class="ttname"><a href="classpFlow_1_1pointStructure.html">pFlow::pointStructure</a></div><div class="ttdef"><b>Definition:</b> <a href="pointStructure_8hpp_source.html#l00044">pointStructure.hpp:44</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1iIstream_html"><div class="ttname"><a href="classpFlow_1_1iIstream.html">pFlow::iIstream</a></div><div class="ttdef"><b>Definition:</b> <a href="iIstream_8hpp_source.html#l00033">iIstream.hpp:33</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointField_html"><div class="ttname"><a href="classpFlow_1_1pointField.html">pFlow::pointField</a></div><div class="ttdef"><b>Definition:</b> <a href="pointField_8hpp_source.html#l00033">pointField.hpp:33</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointStructure_html"><div class="ttname"><a href="classpFlow_1_1pointStructure.html">pFlow::pointStructure</a></div><div class="ttdef"><b>Definition:</b> <a href="pointStructure_8hpp_source.html#l00034">pointStructure.hpp:34</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1iIstream_html"><div class="ttname"><a href="classpFlow_1_1iIstream.html">pFlow::iIstream</a></div><div class="ttdoc">Interface class for any input stream</div><div class="ttdef"><b>Definition:</b> <a href="iIstream_8hpp_source.html#l00037">iIstream.hpp:37</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_a9626dd5e2e9be37e395ace9fc484d879"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#a9626dd5e2e9be37e395ace9fc484d879">pFlow::AdamsBashforth3::add_vCtor</a></div><div class="ttdeci">add_vCtor(integration, AdamsBashforth3, word)</div><div class="ttdoc">Add this to the virtual constructor table.</div></div>
-<div class="ttc" id="anamespacepFlow_html_aae6ad039f09c0676db11bd114136a3fa"><div class="ttname"><a href="namespacepFlow.html#aae6ad039f09c0676db11bd114136a3fa">pFlow::int32</a></div><div class="ttdeci">int int32</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00053">builtinTypes.hpp:53</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_aae6ad039f09c0676db11bd114136a3fa"><div class="ttname"><a href="namespacepFlow.html#aae6ad039f09c0676db11bd114136a3fa">pFlow::int32</a></div><div class="ttdeci">int int32</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00050">builtinTypes.hpp:50</a></div></div>
 <div class="ttc" id="anamespacepFlow_html_a85ed561d066dae339196cd058783674f"><div class="ttname"><a href="namespacepFlow.html#a85ed561d066dae339196cd058783674f">pFlow::operator&gt;&gt;</a></div><div class="ttdeci">INLINE_FUNCTION iIstream &amp; operator&gt;&gt;(iIstream &amp;str, AB3History &amp;ab3)</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00041">AdamsBashforth3.hpp:41</a></div></div>
 <div class="ttc" id="astructpFlow_1_1AB3History_html_a63d020867c10f8f3fde329eb526a066b"><div class="ttname"><a href="structpFlow_1_1AB3History.html#a63d020867c10f8f3fde329eb526a066b">pFlow::AB3History::dy2_</a></div><div class="ttdeci">realx3 dy2_</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00036">AdamsBashforth3.hpp:36</a></div></div>
 <div class="ttc" id="astructpFlow_1_1AB3History_html_ad542852c8da95d45b6a6014d9f42a663"><div class="ttname"><a href="structpFlow_1_1AB3History.html#ad542852c8da95d45b6a6014d9f42a663">pFlow::AB3History::TypeInfoNV</a></div><div class="ttdeci">TypeInfoNV(&quot;AB3History&quot;)</div></div>
-<div class="ttc" id="aclasspFlow_1_1token_html_a4aba281d025f1d580c3835d67656fd31ab0421ccee09cdeadea4bc12e7f38be24"><div class="ttname"><a href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31ab0421ccee09cdeadea4bc12e7f38be24">pFlow::token::END_LIST</a></div><div class="ttdeci">@ END_LIST</div><div class="ttdoc">End list [isseparator].</div><div class="ttdef"><b>Definition:</b> <a href="token_8hpp_source.html#l00090">token.hpp:90</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1token_html_a4aba281d025f1d580c3835d67656fd31ab0421ccee09cdeadea4bc12e7f38be24"><div class="ttname"><a href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31ab0421ccee09cdeadea4bc12e7f38be24">pFlow::token::END_LIST</a></div><div class="ttdeci">@ END_LIST</div><div class="ttdoc">Begin list [isseparator].</div><div class="ttdef"><b>Definition:</b> <a href="token_8hpp_source.html#l00092">token.hpp:92</a></div></div>
 <div class="ttc" id="astructpFlow_1_1AB3History_html_a419568ee851e74f5356a30fc5ce2eddf"><div class="ttname"><a href="structpFlow_1_1AB3History.html#a419568ee851e74f5356a30fc5ce2eddf">pFlow::AB3History::dy1_</a></div><div class="ttdeci">realx3 dy1_</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00035">AdamsBashforth3.hpp:35</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1pointField_html_afef304b4d4497e45857f6edef9b049e6"><div class="ttname"><a href="classpFlow_1_1pointField.html#afef304b4d4497e45857f6edef9b049e6">pFlow::pointField::activeRange</a></div><div class="ttdeci">range activeRange() const</div><div class="ttdef"><b>Definition:</b> <a href="pointField_8hpp_source.html#l00138">pointField.hpp:138</a></div></div>
 <div class="ttc" id="anamespacepFlow_html_a148d74ad0977268be8ea8b26a147f619"><div class="ttname"><a href="namespacepFlow.html#a148d74ad0977268be8ea8b26a147f619">pFlow::operator&lt;&lt;</a></div><div class="ttdeci">INLINE_FUNCTION iOstream &amp; operator&lt;&lt;(iOstream &amp;str, const AB3History &amp;ab3)</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00057">AdamsBashforth3.hpp:57</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1VectorSingle_html"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html">pFlow::VectorSingle</a></div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8hpp_source.html#l00047">VectorSingle.hpp:47</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1VectorSingle_html"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html">pFlow::VectorSingle</a></div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8hpp_source.html#l00044">VectorSingle.hpp:44</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_a152b752a6b7b37e70fa5e7c99a484783"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#a152b752a6b7b37e70fa5e7c99a484783">pFlow::AdamsBashforth3::intAll</a></div><div class="ttdeci">bool intAll(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy, range activeRng)</div><div class="ttdoc">Integrate on all points in the active range.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8cpp_source.html#l00086">AdamsBashforth3.cpp:86</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1integration_html_a10329e18307a60d3fdb203bcbed2b295"><div class="ttname"><a href="classpFlow_1_1integration.html#a10329e18307a60d3fdb203bcbed2b295">pFlow::integration::owner</a></div><div class="ttdeci">repository &amp; owner()</div><div class="ttdoc">Ref to the owner repository.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00127">integration.hpp:127</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1token_html_a4aba281d025f1d580c3835d67656fd31a8042f41e6dc49acd5cf4e86844f79acb"><div class="ttname"><a href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31a8042f41e6dc49acd5cf4e86844f79acb">pFlow::token::BEGIN_LIST</a></div><div class="ttdeci">@ BEGIN_LIST</div><div class="ttdoc">Begin list [isseparator].</div><div class="ttdef"><b>Definition:</b> <a href="token_8hpp_source.html#l00089">token.hpp:89</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1uniquePtr_html"><div class="ttname"><a href="classpFlow_1_1uniquePtr.html">pFlow::uniquePtr</a></div><div class="ttdef"><b>Definition:</b> <a href="uniquePtr_8hpp_source.html#l00044">uniquePtr.hpp:44</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html_a10329e18307a60d3fdb203bcbed2b295"><div class="ttname"><a href="classpFlow_1_1integration.html#a10329e18307a60d3fdb203bcbed2b295">pFlow::integration::owner</a></div><div class="ttdeci">repository &amp; owner()</div><div class="ttdoc">Ref to the owner repository.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00129">integration.hpp:129</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1VectorSingle_html_a51122b76468e0c5f19ea69c5c0ca6cf4"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">pFlow::VectorSingle::deviceViewAll</a></div><div class="ttdeci">INLINE_FUNCTION_H auto &amp; deviceViewAll()</div><div class="ttdoc">Device view range [0,capcity)</div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8cpp_source.html#l00249">VectorSingle.cpp:249</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1token_html_a4aba281d025f1d580c3835d67656fd31a8042f41e6dc49acd5cf4e86844f79acb"><div class="ttname"><a href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31a8042f41e6dc49acd5cf4e86844f79acb">pFlow::token::BEGIN_LIST</a></div><div class="ttdeci">@ BEGIN_LIST</div><div class="ttdoc">End entry [isseparator].</div><div class="ttdef"><b>Definition:</b> <a href="token_8hpp_source.html#l00091">token.hpp:91</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1uniquePtr_html"><div class="ttname"><a href="classpFlow_1_1uniquePtr.html">pFlow::uniquePtr</a></div><div class="ttdef"><b>Definition:</b> <a href="uniquePtr_8hpp_source.html#l00042">uniquePtr.hpp:42</a></div></div>
 <div class="ttc" id="aintegration_8hpp_html"><div class="ttname"><a href="integration_8hpp.html">integration.hpp</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_a29f8a3197295f0ffa73d24bbacc6228c"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#a29f8a3197295f0ffa73d24bbacc6228c">pFlow::AdamsBashforth3::clone</a></div><div class="ttdeci">uniquePtr&lt; integration &gt; clone() const override</div><div class="ttdoc">Polymorphic copy/cloning.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00103">AdamsBashforth3.hpp:103</a></div></div>
-<div class="ttc" id="apFlowMacros_8hpp_html_aa7d4742cdf24a3792276e669531d145c"><div class="ttname"><a href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a></div><div class="ttdeci">#define LAMBDA_HD</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00054">pFlowMacros.hpp:54</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_a29f8a3197295f0ffa73d24bbacc6228c"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#a29f8a3197295f0ffa73d24bbacc6228c">pFlow::AdamsBashforth3::clone</a></div><div class="ttdeci">uniquePtr&lt; integration &gt; clone() const override</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00103">AdamsBashforth3.hpp:103</a></div></div>
+<div class="ttc" id="apFlowMacros_8hpp_html_aa7d4742cdf24a3792276e669531d145c"><div class="ttname"><a href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a></div><div class="ttdeci">#define LAMBDA_HD</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00058">pFlowMacros.hpp:58</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_af73af994d6bfc50ff9bda4606cac960b"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#af73af994d6bfc50ff9bda4606cac960b">pFlow::AdamsBashforth3::TypeInfo</a></div><div class="ttdeci">TypeInfo(&quot;AdamsBashforth3&quot;)</div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html">pFlow::AdamsBashforth3</a></div><div class="ttdoc">Third order Adams-Bashforth integration method for solving ODE.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00073">AdamsBashforth3.hpp:73</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html_a05cf94b87db6b7d4b9c2d2eb81592cf3"><div class="ttname"><a href="classpFlow_1_1integration.html#a05cf94b87db6b7d4b9c2d2eb81592cf3">pFlow::integration::method</a></div><div class="ttdeci">virtual word method() const =0</div><div class="ttdoc">return integration method</div></div>
 <div class="ttc" id="aclasspFlow_1_1repository_html"><div class="ttname"><a href="classpFlow_1_1repository.html">pFlow::repository</a></div><div class="ttdef"><b>Definition:</b> <a href="repository_8hpp_source.html#l00034">repository.hpp:34</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1VectorSingle_html_a18052bc1ad8ea07ea5b6205321cba10e"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html#a18052bc1ad8ea07ea5b6205321cba10e">pFlow::VectorSingle::deviceVectorAll</a></div><div class="ttdeci">INLINE_FUNCTION_H viewType &amp; deviceVectorAll()</div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8hpp_source.html#l00297">VectorSingle.hpp:297</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1triple_html"><div class="ttname"><a href="classpFlow_1_1triple.html">pFlow::triple&lt; real &gt;</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1Vector_html"><div class="ttname"><a href="classpFlow_1_1Vector.html">pFlow::Vector&lt; realx3 &gt;</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1iOstream_html"><div class="ttname"><a href="classpFlow_1_1iOstream.html">pFlow::iOstream</a></div><div class="ttdef"><b>Definition:</b> <a href="iOstream_8hpp_source.html#l00053">iOstream.hpp:53</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1indexContainer_html"><div class="ttname"><a href="classpFlow_1_1indexContainer.html">pFlow::indexContainer&lt; int32 &gt;</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1indexContainer_html"><div class="ttname"><a href="classpFlow_1_1indexContainer.html">pFlow::indexContainer</a></div><div class="ttdoc">It holds two vectors of indecis on Host and Device.</div><div class="ttdef"><b>Definition:</b> <a href="indexContainer_8hpp_source.html#l00039">indexContainer.hpp:39</a></div></div>
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
   <ul>
     <li class="navelem"><a class="el" href="dir_68267d1309a1af8e8297ef4c3efbcdba.html">src</a></li><li class="navelem"><a class="el" href="dir_5ff0557589c78f704a7131791f9a8bc6.html">Integration</a></li><li class="navelem"><a class="el" href="dir_9fe92fbd2d3b874c8837b9b8f1c20305.html">AdamsBashforth3</a></li><li class="navelem"><a class="el" href="AdamsBashforth3_8hpp.html">AdamsBashforth3.hpp</a></li>

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+<div class="ttc" id="anamespacepFlow_html_a12b4d93aa9730629403d73e84386bff5"><div class="ttname"><a href="namespacepFlow.html#a12b4d93aa9730629403d73e84386bff5">pFlow::groupNames</a></div><div class="ttdeci">word groupNames(const word &amp;bw, const word &amp;tw, char sep='.')</div><div class="ttdoc">Group words and output bw.tw.</div><div class="ttdef"><b>Definition:</b> <a href="bTypesFunctions_8cpp_source.html#l00179">bTypesFunctions.cpp:179</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_a8da2088458d635dfa1fbe1823a3bfd6d"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#a8da2088458d635dfa1fbe1823a3bfd6d">pFlow::AdamsBashforth4::setInitialVals</a></div><div class="ttdeci">bool setInitialVals(const int32IndexContainer &amp;newIndices, const realx3Vector &amp;y) override</div><div class="ttdoc">Set the initial values for new indices.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8cpp_source.html#l00079">AdamsBashforth4.cpp:79</a></div></div>
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 <div class="ttc" id="astructpFlow_1_1AB4History_html"><div class="ttname"><a href="structpFlow_1_1AB4History.html">pFlow::AB4History</a></div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8hpp_source.html#l00031">AdamsBashforth4.hpp:31</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_a152b752a6b7b37e70fa5e7c99a484783"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#a152b752a6b7b37e70fa5e7c99a484783">pFlow::AdamsBashforth4::intAll</a></div><div class="ttdeci">bool intAll(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy, range activeRng)</div><div class="ttdoc">Integrate on all points in the active range.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8cpp_source.html#l00086">AdamsBashforth4.cpp:86</a></div></div>
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-<div class="ttc" id="aclasspFlow_1_1indexContainer_html"><div class="ttname"><a href="classpFlow_1_1indexContainer.html">pFlow::indexContainer&lt; int32 &gt;</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_ac755e4bf02c3732d1eb89de9e903ebdb"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#ac755e4bf02c3732d1eb89de9e903ebdb">pFlow::AdamsBashforth4::correct</a></div><div class="ttdeci">bool correct(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy) override</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8cpp_source.html#l00060">AdamsBashforth4.cpp:60</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1indexContainer_html"><div class="ttname"><a href="classpFlow_1_1indexContainer.html">pFlow::indexContainer</a></div><div class="ttdoc">It holds two vectors of indecis on Host and Device.</div><div class="ttdef"><b>Definition:</b> <a href="indexContainer_8hpp_source.html#l00039">indexContainer.hpp:39</a></div></div>
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
   <ul>
     <li class="navelem"><a class="el" href="dir_68267d1309a1af8e8297ef4c3efbcdba.html">src</a></li><li class="navelem"><a class="el" href="dir_5ff0557589c78f704a7131791f9a8bc6.html">Integration</a></li><li class="navelem"><a class="el" href="dir_543abfe930aaf536629272b1dc711075.html">AdamsBashforth4</a></li><li class="navelem"><a class="el" href="AdamsBashforth4_8cpp.html">AdamsBashforth4.cpp</a></li>

doc/code-documentation/html/AdamsBashforth4_8hpp.html

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+<div class="ttc" id="anamespacepFlow_html_a6192191c0e9c178a44ee1ac350fde476"><div class="ttname"><a href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">pFlow::real</a></div><div class="ttdeci">float real</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00045">builtinTypes.hpp:45</a></div></div>
 <div class="ttc" id="apFlowMacros_8hpp_html_a86d500a34c624c2cae56bc25a31b12f3"><div class="ttname"><a href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a></div><div class="ttdeci">#define UNUSED(x)</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00035">pFlowMacros.hpp:35</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1integration_html"><div class="ttname"><a href="classpFlow_1_1integration.html">pFlow::integration</a></div><div class="ttdoc">Base class for integrating the first order ODE (IVP)</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00049">integration.hpp:49</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_a29f8a3197295f0ffa73d24bbacc6228c"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#a29f8a3197295f0ffa73d24bbacc6228c">pFlow::AdamsBashforth4::clone</a></div><div class="ttdeci">uniquePtr&lt; integration &gt; clone() const override</div><div class="ttdoc">Polymorphic copy/cloning.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8hpp_source.html#l00107">AdamsBashforth4.hpp:107</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1integration_html_a5a622149e803f0fa292a95784c12a7b8"><div class="ttname"><a href="classpFlow_1_1integration.html#a5a622149e803f0fa292a95784c12a7b8">pFlow::integration::pStruct</a></div><div class="ttdeci">const auto &amp; pStruct() const</div><div class="ttdoc">Const ref to pointStructure.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00113">integration.hpp:113</a></div></div>
-<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00063">builtinTypes.hpp:63</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1iIstream_html_a8d82c951160ac1444ee2a2d9ae1ecb11"><div class="ttname"><a href="classpFlow_1_1iIstream.html#a8d82c951160ac1444ee2a2d9ae1ecb11">pFlow::iIstream::readEnd</a></div><div class="ttdeci">bool readEnd(const char *funcName)</div><div class="ttdef"><b>Definition:</b> <a href="iIstream_8cpp_source.html#l00231">iIstream.cpp:231</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html"><div class="ttname"><a href="classpFlow_1_1integration.html">pFlow::integration</a></div><div class="ttdoc">Base class for integrating the first order ODE (IVP)</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00051">integration.hpp:51</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_a29f8a3197295f0ffa73d24bbacc6228c"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#a29f8a3197295f0ffa73d24bbacc6228c">pFlow::AdamsBashforth4::clone</a></div><div class="ttdeci">uniquePtr&lt; integration &gt; clone() const override</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8hpp_source.html#l00107">AdamsBashforth4.hpp:107</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1internalField_html_ae49b1b421c0a7de757a2fdc46f163498"><div class="ttname"><a href="classpFlow_1_1internalField.html#ae49b1b421c0a7de757a2fdc46f163498">pFlow::internalField&lt; T, void &gt;::deviceViewAll</a></div><div class="ttdeci">const auto &amp; deviceViewAll() const</div><div class="ttdef"><b>Definition:</b> <a href="internalField_8hpp_source.html#l00092">internalField.hpp:92</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html_a5a622149e803f0fa292a95784c12a7b8"><div class="ttname"><a href="classpFlow_1_1integration.html#a5a622149e803f0fa292a95784c12a7b8">pFlow::integration::pStruct</a></div><div class="ttdeci">const auto &amp; pStruct() const</div><div class="ttdoc">Const ref to pointStructure.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00115">integration.hpp:115</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00064">builtinTypes.hpp:64</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1iIstream_html_a8d82c951160ac1444ee2a2d9ae1ecb11"><div class="ttname"><a href="classpFlow_1_1iIstream.html#a8d82c951160ac1444ee2a2d9ae1ecb11">pFlow::iIstream::readEnd</a></div><div class="ttdeci">bool readEnd(const char *funcName)</div><div class="ttdoc">End read of data chunk, ends with ')' return true or FatalIOError.</div><div class="ttdef"><b>Definition:</b> <a href="iIstream_8cpp_source.html#l00258">iIstream.cpp:258</a></div></div>
 <div class="ttc" id="apointFields_8hpp_html"><div class="ttname"><a href="pointFields_8hpp.html">pointFields.hpp</a></div></div>
 <div class="ttc" id="apFlowMacros_8hpp_html_a922d2784284e8f6ee4009c3d92ba48b6"><div class="ttname"><a href="pFlowMacros_8hpp.html#a922d2784284e8f6ee4009c3d92ba48b6">FUNCTION_NAME</a></div><div class="ttdeci">#define FUNCTION_NAME</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00029">pFlowMacros.hpp:29</a></div></div>
-<div class="ttc" id="anamespacepFlow_html_aa3a14d3c76643399fc4edd8eca14944a"><div class="ttname"><a href="namespacepFlow.html#aa3a14d3c76643399fc4edd8eca14944a">pFlow::DefaultExecutionSpace</a></div><div class="ttdeci">Kokkos::DefaultExecutionSpace DefaultExecutionSpace</div><div class="ttdef"><b>Definition:</b> <a href="KokkosTypes_8hpp_source.html#l00049">KokkosTypes.hpp:49</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_aa3a14d3c76643399fc4edd8eca14944a"><div class="ttname"><a href="namespacepFlow.html#aa3a14d3c76643399fc4edd8eca14944a">pFlow::DefaultExecutionSpace</a></div><div class="ttdeci">Kokkos::DefaultExecutionSpace DefaultExecutionSpace</div><div class="ttdoc">Default execution space, it can be device exe.</div><div class="ttdef"><b>Definition:</b> <a href="KokkosTypes_8hpp_source.html#l00061">KokkosTypes.hpp:61</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_a1084909fe2f0dbd8f2af68ab4e94692a"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#a1084909fe2f0dbd8f2af68ab4e94692a">pFlow::AdamsBashforth4::add_vCtor</a></div><div class="ttdeci">add_vCtor(integration, AdamsBashforth4, word)</div><div class="ttdoc">Add a this to the virtual constructor table.</div></div>
-<div class="ttc" id="aclasspFlow_1_1token_html_a4aba281d025f1d580c3835d67656fd31ac08dae7edcb5c5bb959fee5971fbad95"><div class="ttname"><a href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31ac08dae7edcb5c5bb959fee5971fbad95">pFlow::token::SPACE</a></div><div class="ttdeci">@ SPACE</div><div class="ttdoc">Space [isspace].</div><div class="ttdef"><b>Definition:</b> <a href="token_8hpp_source.html#l00084">token.hpp:84</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1token_html_a4aba281d025f1d580c3835d67656fd31ac08dae7edcb5c5bb959fee5971fbad95"><div class="ttname"><a href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31ac08dae7edcb5c5bb959fee5971fbad95">pFlow::token::SPACE</a></div><div class="ttdeci">@ SPACE</div><div class="ttdoc">Nul character.</div><div class="ttdef"><b>Definition:</b> <a href="token_8hpp_source.html#l00086">token.hpp:86</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_a7962c8cac5d82d0793dfeaba6c162f4d"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#a7962c8cac5d82d0793dfeaba6c162f4d">pFlow::AdamsBashforth4::TypeInfo</a></div><div class="ttdeci">TypeInfo(&quot;AdamsBashforth4&quot;)</div><div class="ttdoc">Type info.</div></div>
-<div class="ttc" id="aclasspFlow_1_1integration_html_a4e30df3927ef1cdd2490cd85018518f5"><div class="ttname"><a href="classpFlow_1_1integration.html#a4e30df3927ef1cdd2490cd85018518f5">pFlow::integration::baseName</a></div><div class="ttdeci">const word &amp; baseName() const</div><div class="ttdoc">Base name.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00120">integration.hpp:120</a></div></div>
-<div class="ttc" id="anamespacepFlow_html"><div class="ttname"><a href="namespacepFlow.html">pFlow</a></div><div class="ttdef"><b>Definition:</b> <a href="demComponent_8hpp_source.html#l00028">demComponent.hpp:28</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html_a4e30df3927ef1cdd2490cd85018518f5"><div class="ttname"><a href="classpFlow_1_1integration.html#a4e30df3927ef1cdd2490cd85018518f5">pFlow::integration::baseName</a></div><div class="ttdeci">const word &amp; baseName() const</div><div class="ttdoc">Base name.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00122">integration.hpp:122</a></div></div>
+<div class="ttc" id="anamespacepFlow_html"><div class="ttname"><a href="namespacepFlow.html">pFlow</a></div><div class="ttdef"><b>Definition:</b> <a href="demGeometry_8hpp_source.html#l00027">demGeometry.hpp:27</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1IOstream_html_a367eb3425fc4e8270e2aa961df8ac8a5"><div class="ttname"><a href="classpFlow_1_1IOstream.html#a367eb3425fc4e8270e2aa961df8ac8a5">pFlow::IOstream::check</a></div><div class="ttdeci">virtual bool check(const char *operation) const</div><div class="ttdoc">Check IOstream status for given operation.</div><div class="ttdef"><b>Definition:</b> <a href="IOstream_8cpp_source.html#l00042">IOstream.cpp:42</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_a8c3fff8fec7e5ef08cea578fed2e5fae"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#a8c3fff8fec7e5ef08cea578fed2e5fae">pFlow::AdamsBashforth4::~AdamsBashforth4</a></div><div class="ttdeci">virtual ~AdamsBashforth4()=default</div><div class="ttdoc">Destructor.</div></div>
-<div class="ttc" id="aclasspFlow_1_1pointField_html"><div class="ttname"><a href="classpFlow_1_1pointField.html">pFlow::pointField</a></div><div class="ttdef"><b>Definition:</b> <a href="pointField_8hpp_source.html#l00035">pointField.hpp:35</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1pointStructure_html"><div class="ttname"><a href="classpFlow_1_1pointStructure.html">pFlow::pointStructure</a></div><div class="ttdef"><b>Definition:</b> <a href="pointStructure_8hpp_source.html#l00044">pointStructure.hpp:44</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1iIstream_html"><div class="ttname"><a href="classpFlow_1_1iIstream.html">pFlow::iIstream</a></div><div class="ttdef"><b>Definition:</b> <a href="iIstream_8hpp_source.html#l00033">iIstream.hpp:33</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointField_html"><div class="ttname"><a href="classpFlow_1_1pointField.html">pFlow::pointField</a></div><div class="ttdef"><b>Definition:</b> <a href="pointField_8hpp_source.html#l00033">pointField.hpp:33</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointStructure_html"><div class="ttname"><a href="classpFlow_1_1pointStructure.html">pFlow::pointStructure</a></div><div class="ttdef"><b>Definition:</b> <a href="pointStructure_8hpp_source.html#l00034">pointStructure.hpp:34</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1iIstream_html"><div class="ttname"><a href="classpFlow_1_1iIstream.html">pFlow::iIstream</a></div><div class="ttdoc">Interface class for any input stream</div><div class="ttdef"><b>Definition:</b> <a href="iIstream_8hpp_source.html#l00037">iIstream.hpp:37</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_ace46ff4fbe3c001c816dbc4f9f67606f"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#ace46ff4fbe3c001c816dbc4f9f67606f">pFlow::AdamsBashforth4::rpIntegration</a></div><div class="ttdeci">Kokkos::RangePolicy&lt; DefaultExecutionSpace, Kokkos::Schedule&lt; Kokkos::Static &gt;, Kokkos::IndexType&lt; int32 &gt; &gt; rpIntegration</div><div class="ttdoc">Range policy for integration kernel.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8hpp_source.html#l00091">AdamsBashforth4.hpp:91</a></div></div>
-<div class="ttc" id="anamespacepFlow_html_aae6ad039f09c0676db11bd114136a3fa"><div class="ttname"><a href="namespacepFlow.html#aae6ad039f09c0676db11bd114136a3fa">pFlow::int32</a></div><div class="ttdeci">int int32</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00053">builtinTypes.hpp:53</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_aae6ad039f09c0676db11bd114136a3fa"><div class="ttname"><a href="namespacepFlow.html#aae6ad039f09c0676db11bd114136a3fa">pFlow::int32</a></div><div class="ttdeci">int int32</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00050">builtinTypes.hpp:50</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_afb1938bc6cfc199cbd70f224040d4afc"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#afb1938bc6cfc199cbd70f224040d4afc">pFlow::AdamsBashforth4::predict</a></div><div class="ttdeci">bool predict(real UNUSED(dt), realx3Vector_D &amp;UNUSED(y), realx3Vector_D &amp;UNUSED(dy)) override</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8cpp_source.html#l00049">AdamsBashforth4.cpp:49</a></div></div>
 <div class="ttc" id="astructpFlow_1_1AB4History_html_a8a588b9f1b4c4b66c2f3d025548fdd8e"><div class="ttname"><a href="structpFlow_1_1AB4History.html#a8a588b9f1b4c4b66c2f3d025548fdd8e">pFlow::AB4History::TypeInfoNV</a></div><div class="ttdeci">TypeInfoNV(&quot;AB4History&quot;)</div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_aceb0c803bb6e5c46a1695c4e5b6e641f"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#aceb0c803bb6e5c46a1695c4e5b6e641f">pFlow::AdamsBashforth4::needSetInitialVals</a></div><div class="ttdeci">bool needSetInitialVals() const override</div><div class="ttdoc">Check if the method requires any set initial vals.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8hpp_source.html#l00138">AdamsBashforth4.hpp:138</a></div></div>
 <div class="ttc" id="anamespacepFlow_html_a85ed561d066dae339196cd058783674f"><div class="ttname"><a href="namespacepFlow.html#a85ed561d066dae339196cd058783674f">pFlow::operator&gt;&gt;</a></div><div class="ttdeci">INLINE_FUNCTION iIstream &amp; operator&gt;&gt;(iIstream &amp;str, AB3History &amp;ab3)</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00041">AdamsBashforth3.hpp:41</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1token_html_a4aba281d025f1d580c3835d67656fd31ab0421ccee09cdeadea4bc12e7f38be24"><div class="ttname"><a href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31ab0421ccee09cdeadea4bc12e7f38be24">pFlow::token::END_LIST</a></div><div class="ttdeci">@ END_LIST</div><div class="ttdoc">End list [isseparator].</div><div class="ttdef"><b>Definition:</b> <a href="token_8hpp_source.html#l00090">token.hpp:90</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1token_html_a4aba281d025f1d580c3835d67656fd31ab0421ccee09cdeadea4bc12e7f38be24"><div class="ttname"><a href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31ab0421ccee09cdeadea4bc12e7f38be24">pFlow::token::END_LIST</a></div><div class="ttdeci">@ END_LIST</div><div class="ttdoc">Begin list [isseparator].</div><div class="ttdef"><b>Definition:</b> <a href="token_8hpp_source.html#l00092">token.hpp:92</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html">pFlow::AdamsBashforth4</a></div><div class="ttdoc">Fourth order Adams-Bashforth integration method for solving ODE.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8hpp_source.html#l00077">AdamsBashforth4.hpp:77</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1pointField_html_afef304b4d4497e45857f6edef9b049e6"><div class="ttname"><a href="classpFlow_1_1pointField.html#afef304b4d4497e45857f6edef9b049e6">pFlow::pointField::activeRange</a></div><div class="ttdeci">range activeRange() const</div><div class="ttdef"><b>Definition:</b> <a href="pointField_8hpp_source.html#l00138">pointField.hpp:138</a></div></div>
 <div class="ttc" id="anamespacepFlow_html_a148d74ad0977268be8ea8b26a147f619"><div class="ttname"><a href="namespacepFlow.html#a148d74ad0977268be8ea8b26a147f619">pFlow::operator&lt;&lt;</a></div><div class="ttdeci">INLINE_FUNCTION iOstream &amp; operator&lt;&lt;(iOstream &amp;str, const AB3History &amp;ab3)</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00057">AdamsBashforth3.hpp:57</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1VectorSingle_html"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html">pFlow::VectorSingle</a></div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8hpp_source.html#l00047">VectorSingle.hpp:47</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1integration_html_a10329e18307a60d3fdb203bcbed2b295"><div class="ttname"><a href="classpFlow_1_1integration.html#a10329e18307a60d3fdb203bcbed2b295">pFlow::integration::owner</a></div><div class="ttdeci">repository &amp; owner()</div><div class="ttdoc">Ref to the owner repository.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00127">integration.hpp:127</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1VectorSingle_html"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html">pFlow::VectorSingle</a></div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8hpp_source.html#l00044">VectorSingle.hpp:44</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html_a10329e18307a60d3fdb203bcbed2b295"><div class="ttname"><a href="classpFlow_1_1integration.html#a10329e18307a60d3fdb203bcbed2b295">pFlow::integration::owner</a></div><div class="ttdeci">repository &amp; owner()</div><div class="ttdoc">Ref to the owner repository.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00129">integration.hpp:129</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1VectorSingle_html_a51122b76468e0c5f19ea69c5c0ca6cf4"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">pFlow::VectorSingle::deviceViewAll</a></div><div class="ttdeci">INLINE_FUNCTION_H auto &amp; deviceViewAll()</div><div class="ttdoc">Device view range [0,capcity)</div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8cpp_source.html#l00249">VectorSingle.cpp:249</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_a69029aec4bfcd45b781d1cfc65359fcb"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#a69029aec4bfcd45b781d1cfc65359fcb">pFlow::AdamsBashforth4::AdamsBashforth4</a></div><div class="ttdeci">AdamsBashforth4(const word &amp;baseName, repository &amp;owner, const pointStructure &amp;pStruct, const word &amp;method)</div><div class="ttdoc">Construct from components.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8cpp_source.html#l00026">AdamsBashforth4.cpp:26</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1token_html_a4aba281d025f1d580c3835d67656fd31a8042f41e6dc49acd5cf4e86844f79acb"><div class="ttname"><a href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31a8042f41e6dc49acd5cf4e86844f79acb">pFlow::token::BEGIN_LIST</a></div><div class="ttdeci">@ BEGIN_LIST</div><div class="ttdoc">Begin list [isseparator].</div><div class="ttdef"><b>Definition:</b> <a href="token_8hpp_source.html#l00089">token.hpp:89</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1uniquePtr_html"><div class="ttname"><a href="classpFlow_1_1uniquePtr.html">pFlow::uniquePtr</a></div><div class="ttdef"><b>Definition:</b> <a href="uniquePtr_8hpp_source.html#l00044">uniquePtr.hpp:44</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1token_html_a4aba281d025f1d580c3835d67656fd31a8042f41e6dc49acd5cf4e86844f79acb"><div class="ttname"><a href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31a8042f41e6dc49acd5cf4e86844f79acb">pFlow::token::BEGIN_LIST</a></div><div class="ttdeci">@ BEGIN_LIST</div><div class="ttdoc">End entry [isseparator].</div><div class="ttdef"><b>Definition:</b> <a href="token_8hpp_source.html#l00091">token.hpp:91</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1uniquePtr_html"><div class="ttname"><a href="classpFlow_1_1uniquePtr.html">pFlow::uniquePtr</a></div><div class="ttdef"><b>Definition:</b> <a href="uniquePtr_8hpp_source.html#l00042">uniquePtr.hpp:42</a></div></div>
 <div class="ttc" id="aintegration_8hpp_html"><div class="ttname"><a href="integration_8hpp.html">integration.hpp</a></div></div>
-<div class="ttc" id="apFlowMacros_8hpp_html_aa7d4742cdf24a3792276e669531d145c"><div class="ttname"><a href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a></div><div class="ttdeci">#define LAMBDA_HD</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00054">pFlowMacros.hpp:54</a></div></div>
+<div class="ttc" id="apFlowMacros_8hpp_html_aa7d4742cdf24a3792276e669531d145c"><div class="ttname"><a href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a></div><div class="ttdeci">#define LAMBDA_HD</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00058">pFlowMacros.hpp:58</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_a8da2088458d635dfa1fbe1823a3bfd6d"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#a8da2088458d635dfa1fbe1823a3bfd6d">pFlow::AdamsBashforth4::setInitialVals</a></div><div class="ttdeci">bool setInitialVals(const int32IndexContainer &amp;newIndices, const realx3Vector &amp;y) override</div><div class="ttdoc">Set the initial values for new indices.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8cpp_source.html#l00079">AdamsBashforth4.cpp:79</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html_a05cf94b87db6b7d4b9c2d2eb81592cf3"><div class="ttname"><a href="classpFlow_1_1integration.html#a05cf94b87db6b7d4b9c2d2eb81592cf3">pFlow::integration::method</a></div><div class="ttdeci">virtual word method() const =0</div><div class="ttdoc">return integration method</div></div>
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 <div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_afc6b0e49b18c62aa5edca2a8212c1292"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#afc6b0e49b18c62aa5edca2a8212c1292">pFlow::AdamsBashforth4::history_</a></div><div class="ttdeci">pointField&lt; VectorSingle, AB4History &gt; &amp; history_</div><div class="ttdoc">Integration history.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8hpp_source.html#l00084">AdamsBashforth4.hpp:84</a></div></div>
 <div class="ttc" id="astructpFlow_1_1AB4History_html_a419568ee851e74f5356a30fc5ce2eddf"><div class="ttname"><a href="structpFlow_1_1AB4History.html#a419568ee851e74f5356a30fc5ce2eddf">pFlow::AB4History::dy1_</a></div><div class="ttdeci">realx3 dy1_</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8hpp_source.html#l00035">AdamsBashforth4.hpp:35</a></div></div>
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 <div class="ttc" id="aclasspFlow_1_1triple_html"><div class="ttname"><a href="classpFlow_1_1triple.html">pFlow::triple&lt; real &gt;</a></div></div>
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 <div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_a152b752a6b7b37e70fa5e7c99a484783"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#a152b752a6b7b37e70fa5e7c99a484783">pFlow::AdamsBashforth4::intAll</a></div><div class="ttdeci">bool intAll(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy, range activeRng)</div><div class="ttdoc">Integrate on all points in the active range.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8cpp_source.html#l00086">AdamsBashforth4.cpp:86</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1iOstream_html"><div class="ttname"><a href="classpFlow_1_1iOstream.html">pFlow::iOstream</a></div><div class="ttdoc">Interface class for any output stream.</div><div class="ttdef"><b>Definition:</b> <a href="iOstream_8hpp_source.html#l00059">iOstream.hpp:59</a></div></div>
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-<div class="ttc" id="aclasspFlow_1_1indexContainer_html"><div class="ttname"><a href="classpFlow_1_1indexContainer.html">pFlow::indexContainer&lt; int32 &gt;</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_ac755e4bf02c3732d1eb89de9e903ebdb"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#ac755e4bf02c3732d1eb89de9e903ebdb">pFlow::AdamsBashforth4::correct</a></div><div class="ttdeci">bool correct(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy) override</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8cpp_source.html#l00060">AdamsBashforth4.cpp:60</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1indexContainer_html"><div class="ttname"><a href="classpFlow_1_1indexContainer.html">pFlow::indexContainer</a></div><div class="ttdoc">It holds two vectors of indecis on Host and Device.</div><div class="ttdef"><b>Definition:</b> <a href="indexContainer_8hpp_source.html#l00039">indexContainer.hpp:39</a></div></div>
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   <ul>
     <li class="navelem"><a class="el" href="dir_68267d1309a1af8e8297ef4c3efbcdba.html">src</a></li><li class="navelem"><a class="el" href="dir_5ff0557589c78f704a7131791f9a8bc6.html">Integration</a></li><li class="navelem"><a class="el" href="dir_543abfe930aaf536629272b1dc711075.html">AdamsBashforth4</a></li><li class="navelem"><a class="el" href="AdamsBashforth4_8hpp.html">AdamsBashforth4.hpp</a></li>

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+<div class="line"><a name="l00035"></a><span class="lineno">   35</span>&#160;        owner.emplaceObject&lt;<a class="code" href="classpFlow_1_1pointField.html">pointField&lt;VectorSingle,AB5History&gt;</a>&gt;(</div>
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+<div class="line"><a name="l00093"></a><span class="lineno">   93</span>&#160;    <span class="keyword">auto</span> d_y  = y.<a class="code" href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">deviceViewAll</a>();</div>
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-<div class="ttc" id="aclasspFlow_1_1integration_html"><div class="ttname"><a href="classpFlow_1_1integration.html">pFlow::integration</a></div><div class="ttdoc">Base class for integrating the first order ODE (IVP)</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00049">integration.hpp:49</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html"><div class="ttname"><a href="classpFlow_1_1integration.html">pFlow::integration</a></div><div class="ttdoc">Base class for integrating the first order ODE (IVP)</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00051">integration.hpp:51</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1pointField_html"><div class="ttname"><a href="classpFlow_1_1pointField.html">pFlow::pointField</a></div><div class="ttdef"><b>Definition:</b> <a href="pointField_8hpp_source.html#l00033">pointField.hpp:33</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointStructure_html"><div class="ttname"><a href="classpFlow_1_1pointStructure.html">pFlow::pointStructure</a></div><div class="ttdef"><b>Definition:</b> <a href="pointStructure_8hpp_source.html#l00034">pointStructure.hpp:34</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1VectorSingle_html"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html">pFlow::VectorSingle</a></div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8hpp_source.html#l00044">VectorSingle.hpp:44</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1objectFile_html"><div class="ttname"><a href="classpFlow_1_1objectFile.html">pFlow::objectFile</a></div><div class="ttdef"><b>Definition:</b> <a href="objectFile_8hpp_source.html#l00030">objectFile.hpp:30</a></div></div>
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-<div class="line"><a name="l00148"></a><span class="lineno">  148</span>&#160;            <a class="code" href="namespacepFlow.html#a304d8581876270871949bf5d4755036a">range</a> activeRng);</div>
+<div class="line"><a name="l00148"></a><span class="lineno">  148</span>&#160;            range activeRng);</div>
 <div class="line"><a name="l00149"></a><span class="lineno">  149</span>&#160; </div>
 <div class="line"><a name="l00151"></a><span class="lineno">  151</span>&#160;        <span class="keyword">template</span>&lt;<span class="keyword">typename</span> activeFunctor&gt;</div>
 <div class="line"><a name="l00152"></a><span class="lineno">  152</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth5.html#a191dc9197b587f09bb5ee7989b0ba43e">intRange</a>(</div>
@@ -261,10 +261,10 @@ $(document).ready(function(){initNavTree('AdamsBashforth5_8hpp_source.html','');
 <div class="line"><a name="l00165"></a><span class="lineno">  165</span>&#160;    <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; dy,</div>
 <div class="line"><a name="l00166"></a><span class="lineno">  166</span>&#160;    activeFunctor activeP )</div>
 <div class="line"><a name="l00167"></a><span class="lineno">  167</span>&#160;{</div>
-<div class="line"><a name="l00168"></a><span class="lineno">  168</span>&#160;    <span class="keyword">auto</span> d_dy = dy.<a class="code" href="classpFlow_1_1VectorSingle.html#a18052bc1ad8ea07ea5b6205321cba10e">deviceVectorAll</a>();</div>
-<div class="line"><a name="l00169"></a><span class="lineno">  169</span>&#160;    <span class="keyword">auto</span> d_y  = y.<a class="code" href="classpFlow_1_1VectorSingle.html#a18052bc1ad8ea07ea5b6205321cba10e">deviceVectorAll</a>();</div>
-<div class="line"><a name="l00170"></a><span class="lineno">  170</span>&#160;    <span class="keyword">auto</span> d_history = history_.deviceVectorAll();</div>
-<div class="line"><a name="l00171"></a><span class="lineno">  171</span>&#160;    <span class="keyword">auto</span> activeRng = activeP.<a class="code" href="classpFlow_1_1pointField.html#afef304b4d4497e45857f6edef9b049e6">activeRange</a>();</div>
+<div class="line"><a name="l00168"></a><span class="lineno">  168</span>&#160;    <span class="keyword">auto</span> d_dy = dy.<a class="code" href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">deviceViewAll</a>();</div>
+<div class="line"><a name="l00169"></a><span class="lineno">  169</span>&#160;    <span class="keyword">auto</span> d_y  = y.<a class="code" href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">deviceViewAll</a>();</div>
+<div class="line"><a name="l00170"></a><span class="lineno">  170</span>&#160;    <span class="keyword">auto</span> d_history = history_.<a class="code" href="classpFlow_1_1internalField.html#ae49b1b421c0a7de757a2fdc46f163498">deviceViewAll</a>();</div>
+<div class="line"><a name="l00171"></a><span class="lineno">  171</span>&#160;    <span class="keyword">auto</span> activeRng = activeP.activeRange();</div>
 <div class="line"><a name="l00172"></a><span class="lineno">  172</span>&#160; </div>
 <div class="line"><a name="l00173"></a><span class="lineno">  173</span>&#160;    Kokkos::parallel_for(</div>
 <div class="line"><a name="l00174"></a><span class="lineno">  174</span>&#160;        <span class="stringliteral">&quot;AdamsBashforth5::correct&quot;</span>,</div>
@@ -293,61 +293,61 @@ $(document).ready(function(){initNavTree('AdamsBashforth5_8hpp_source.html','');
 <div class="line"><a name="l00197"></a><span class="lineno">  197</span>&#160;<span class="preprocessor">#endif //</span></div>
 </div><!-- fragment --></div><!-- contents -->
 </div><!-- doc-content -->
-<div class="ttc" id="aclasspFlow_1_1iIstream_html_aecfc9cc0a499c7d44de6a7562bcfea3f"><div class="ttname"><a href="classpFlow_1_1iIstream.html#aecfc9cc0a499c7d44de6a7562bcfea3f">pFlow::iIstream::readBegin</a></div><div class="ttdeci">bool readBegin(const char *funcName)</div><div class="ttdef"><b>Definition:</b> <a href="iIstream_8cpp_source.html#l00211">iIstream.cpp:211</a></div></div>
-<div class="ttc" id="apFlowMacros_8hpp_html_afc491fbd69e70abdcb02a8cd3ce2939e"><div class="ttname"><a href="pFlowMacros_8hpp.html#afc491fbd69e70abdcb02a8cd3ce2939e">INLINE_FUNCTION</a></div><div class="ttdeci">#define INLINE_FUNCTION</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00062">pFlowMacros.hpp:62</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1iIstream_html_aecfc9cc0a499c7d44de6a7562bcfea3f"><div class="ttname"><a href="classpFlow_1_1iIstream.html#aecfc9cc0a499c7d44de6a7562bcfea3f">pFlow::iIstream::readBegin</a></div><div class="ttdeci">bool readBegin(const char *funcName)</div><div class="ttdoc">Begin read of data chunk, starts with '('.</div><div class="ttdef"><b>Definition:</b> <a href="iIstream_8cpp_source.html#l00238">iIstream.cpp:238</a></div></div>
+<div class="ttc" id="apFlowMacros_8hpp_html_afc491fbd69e70abdcb02a8cd3ce2939e"><div class="ttname"><a href="pFlowMacros_8hpp.html#afc491fbd69e70abdcb02a8cd3ce2939e">INLINE_FUNCTION</a></div><div class="ttdeci">#define INLINE_FUNCTION</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00066">pFlowMacros.hpp:66</a></div></div>
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-<div class="ttc" id="anamespacepFlow_html_a6192191c0e9c178a44ee1ac350fde476"><div class="ttname"><a href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">pFlow::real</a></div><div class="ttdeci">float real</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00046">builtinTypes.hpp:46</a></div></div>
-<div class="ttc" id="anamespacepFlow_html_a304d8581876270871949bf5d4755036a"><div class="ttname"><a href="namespacepFlow.html#a304d8581876270871949bf5d4755036a">pFlow::range</a></div><div class="ttdeci">kRange&lt; int &gt; range</div><div class="ttdef"><b>Definition:</b> <a href="KokkosTypes_8hpp_source.html#l00059">KokkosTypes.hpp:59</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a6192191c0e9c178a44ee1ac350fde476"><div class="ttname"><a href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">pFlow::real</a></div><div class="ttdeci">float real</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00045">builtinTypes.hpp:45</a></div></div>
 <div class="ttc" id="apFlowMacros_8hpp_html_a86d500a34c624c2cae56bc25a31b12f3"><div class="ttname"><a href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a></div><div class="ttdeci">#define UNUSED(x)</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00035">pFlowMacros.hpp:35</a></div></div>
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-<div class="ttc" id="aclasspFlow_1_1integration_html"><div class="ttname"><a href="classpFlow_1_1integration.html">pFlow::integration</a></div><div class="ttdoc">Base class for integrating the first order ODE (IVP)</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00049">integration.hpp:49</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html"><div class="ttname"><a href="classpFlow_1_1integration.html">pFlow::integration</a></div><div class="ttdoc">Base class for integrating the first order ODE (IVP)</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00051">integration.hpp:51</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1internalField_html_ae49b1b421c0a7de757a2fdc46f163498"><div class="ttname"><a href="classpFlow_1_1internalField.html#ae49b1b421c0a7de757a2fdc46f163498">pFlow::internalField&lt; T, void &gt;::deviceViewAll</a></div><div class="ttdeci">const auto &amp; deviceViewAll() const</div><div class="ttdef"><b>Definition:</b> <a href="internalField_8hpp_source.html#l00092">internalField.hpp:92</a></div></div>
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-<div class="ttc" id="aclasspFlow_1_1integration_html_a5a622149e803f0fa292a95784c12a7b8"><div class="ttname"><a href="classpFlow_1_1integration.html#a5a622149e803f0fa292a95784c12a7b8">pFlow::integration::pStruct</a></div><div class="ttdeci">const auto &amp; pStruct() const</div><div class="ttdoc">Const ref to pointStructure.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00113">integration.hpp:113</a></div></div>
-<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00063">builtinTypes.hpp:63</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1integration_html_a5a622149e803f0fa292a95784c12a7b8"><div class="ttname"><a href="classpFlow_1_1integration.html#a5a622149e803f0fa292a95784c12a7b8">pFlow::integration::pStruct</a></div><div class="ttdeci">const auto &amp; pStruct() const</div><div class="ttdoc">Const ref to pointStructure.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00115">integration.hpp:115</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00064">builtinTypes.hpp:64</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1iIstream_html_a8d82c951160ac1444ee2a2d9ae1ecb11"><div class="ttname"><a href="classpFlow_1_1iIstream.html#a8d82c951160ac1444ee2a2d9ae1ecb11">pFlow::iIstream::readEnd</a></div><div class="ttdeci">bool readEnd(const char *funcName)</div><div class="ttdoc">End read of data chunk, ends with ')' return true or FatalIOError.</div><div class="ttdef"><b>Definition:</b> <a href="iIstream_8cpp_source.html#l00258">iIstream.cpp:258</a></div></div>
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-<div class="ttc" id="anamespacepFlow_html_aa3a14d3c76643399fc4edd8eca14944a"><div class="ttname"><a href="namespacepFlow.html#aa3a14d3c76643399fc4edd8eca14944a">pFlow::DefaultExecutionSpace</a></div><div class="ttdeci">Kokkos::DefaultExecutionSpace DefaultExecutionSpace</div><div class="ttdef"><b>Definition:</b> <a href="KokkosTypes_8hpp_source.html#l00049">KokkosTypes.hpp:49</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_aa3a14d3c76643399fc4edd8eca14944a"><div class="ttname"><a href="namespacepFlow.html#aa3a14d3c76643399fc4edd8eca14944a">pFlow::DefaultExecutionSpace</a></div><div class="ttdeci">Kokkos::DefaultExecutionSpace DefaultExecutionSpace</div><div class="ttdoc">Default execution space, it can be device exe.</div><div class="ttdef"><b>Definition:</b> <a href="KokkosTypes_8hpp_source.html#l00061">KokkosTypes.hpp:61</a></div></div>
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-<div class="ttc" id="aclasspFlow_1_1integration_html_a4e30df3927ef1cdd2490cd85018518f5"><div class="ttname"><a href="classpFlow_1_1integration.html#a4e30df3927ef1cdd2490cd85018518f5">pFlow::integration::baseName</a></div><div class="ttdeci">const word &amp; baseName() const</div><div class="ttdoc">Base name.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00120">integration.hpp:120</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1token_html_a4aba281d025f1d580c3835d67656fd31ac08dae7edcb5c5bb959fee5971fbad95"><div class="ttname"><a href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31ac08dae7edcb5c5bb959fee5971fbad95">pFlow::token::SPACE</a></div><div class="ttdeci">@ SPACE</div><div class="ttdoc">Nul character.</div><div class="ttdef"><b>Definition:</b> <a href="token_8hpp_source.html#l00086">token.hpp:86</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html_a4e30df3927ef1cdd2490cd85018518f5"><div class="ttname"><a href="classpFlow_1_1integration.html#a4e30df3927ef1cdd2490cd85018518f5">pFlow::integration::baseName</a></div><div class="ttdeci">const word &amp; baseName() const</div><div class="ttdoc">Base name.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00122">integration.hpp:122</a></div></div>
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-<div class="ttc" id="anamespacepFlow_html"><div class="ttname"><a href="namespacepFlow.html">pFlow</a></div><div class="ttdef"><b>Definition:</b> <a href="demComponent_8hpp_source.html#l00028">demComponent.hpp:28</a></div></div>
+<div class="ttc" id="anamespacepFlow_html"><div class="ttname"><a href="namespacepFlow.html">pFlow</a></div><div class="ttdef"><b>Definition:</b> <a href="demGeometry_8hpp_source.html#l00027">demGeometry.hpp:27</a></div></div>
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 <div class="ttc" id="astructpFlow_1_1AB5History_html"><div class="ttname"><a href="structpFlow_1_1AB5History.html">pFlow::AB5History</a></div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth5_8hpp_source.html#l00031">AdamsBashforth5.hpp:31</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1pointField_html"><div class="ttname"><a href="classpFlow_1_1pointField.html">pFlow::pointField</a></div><div class="ttdef"><b>Definition:</b> <a href="pointField_8hpp_source.html#l00035">pointField.hpp:35</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1pointStructure_html"><div class="ttname"><a href="classpFlow_1_1pointStructure.html">pFlow::pointStructure</a></div><div class="ttdef"><b>Definition:</b> <a href="pointStructure_8hpp_source.html#l00044">pointStructure.hpp:44</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointField_html"><div class="ttname"><a href="classpFlow_1_1pointField.html">pFlow::pointField</a></div><div class="ttdef"><b>Definition:</b> <a href="pointField_8hpp_source.html#l00033">pointField.hpp:33</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointStructure_html"><div class="ttname"><a href="classpFlow_1_1pointStructure.html">pFlow::pointStructure</a></div><div class="ttdef"><b>Definition:</b> <a href="pointStructure_8hpp_source.html#l00034">pointStructure.hpp:34</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1iIstream_html"><div class="ttname"><a href="classpFlow_1_1iIstream.html">pFlow::iIstream</a></div><div class="ttdoc">Interface class for any input stream</div><div class="ttdef"><b>Definition:</b> <a href="iIstream_8hpp_source.html#l00037">iIstream.hpp:37</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsBashforth5_html_a152b752a6b7b37e70fa5e7c99a484783"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth5.html#a152b752a6b7b37e70fa5e7c99a484783">pFlow::AdamsBashforth5::intAll</a></div><div class="ttdeci">bool intAll(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy, range activeRng)</div><div class="ttdoc">Integrate on all points in the active range.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth5_8cpp_source.html#l00086">AdamsBashforth5.cpp:86</a></div></div>
-<div class="ttc" id="anamespacepFlow_html_aae6ad039f09c0676db11bd114136a3fa"><div class="ttname"><a href="namespacepFlow.html#aae6ad039f09c0676db11bd114136a3fa">pFlow::int32</a></div><div class="ttdeci">int int32</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00053">builtinTypes.hpp:53</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_aae6ad039f09c0676db11bd114136a3fa"><div class="ttname"><a href="namespacepFlow.html#aae6ad039f09c0676db11bd114136a3fa">pFlow::int32</a></div><div class="ttdeci">int int32</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00050">builtinTypes.hpp:50</a></div></div>
 <div class="ttc" id="astructpFlow_1_1AB5History_html_a419568ee851e74f5356a30fc5ce2eddf"><div class="ttname"><a href="structpFlow_1_1AB5History.html#a419568ee851e74f5356a30fc5ce2eddf">pFlow::AB5History::dy1_</a></div><div class="ttdeci">realx3 dy1_</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth5_8hpp_source.html#l00035">AdamsBashforth5.hpp:35</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth5_html_ac755e4bf02c3732d1eb89de9e903ebdb"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth5.html#ac755e4bf02c3732d1eb89de9e903ebdb">pFlow::AdamsBashforth5::correct</a></div><div class="ttdeci">bool correct(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy) override</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth5_8cpp_source.html#l00060">AdamsBashforth5.cpp:60</a></div></div>
 <div class="ttc" id="anamespacepFlow_html_a85ed561d066dae339196cd058783674f"><div class="ttname"><a href="namespacepFlow.html#a85ed561d066dae339196cd058783674f">pFlow::operator&gt;&gt;</a></div><div class="ttdeci">INLINE_FUNCTION iIstream &amp; operator&gt;&gt;(iIstream &amp;str, AB3History &amp;ab3)</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00041">AdamsBashforth3.hpp:41</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1token_html_a4aba281d025f1d580c3835d67656fd31ab0421ccee09cdeadea4bc12e7f38be24"><div class="ttname"><a href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31ab0421ccee09cdeadea4bc12e7f38be24">pFlow::token::END_LIST</a></div><div class="ttdeci">@ END_LIST</div><div class="ttdoc">End list [isseparator].</div><div class="ttdef"><b>Definition:</b> <a href="token_8hpp_source.html#l00090">token.hpp:90</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1AdamsBashforth5_html_a29f8a3197295f0ffa73d24bbacc6228c"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth5.html#a29f8a3197295f0ffa73d24bbacc6228c">pFlow::AdamsBashforth5::clone</a></div><div class="ttdeci">uniquePtr&lt; integration &gt; clone() const override</div><div class="ttdoc">Polymorphic copy/cloning.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth5_8hpp_source.html#l00108">AdamsBashforth5.hpp:108</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1token_html_a4aba281d025f1d580c3835d67656fd31ab0421ccee09cdeadea4bc12e7f38be24"><div class="ttname"><a href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31ab0421ccee09cdeadea4bc12e7f38be24">pFlow::token::END_LIST</a></div><div class="ttdeci">@ END_LIST</div><div class="ttdoc">Begin list [isseparator].</div><div class="ttdef"><b>Definition:</b> <a href="token_8hpp_source.html#l00092">token.hpp:92</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth5_html_a29f8a3197295f0ffa73d24bbacc6228c"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth5.html#a29f8a3197295f0ffa73d24bbacc6228c">pFlow::AdamsBashforth5::clone</a></div><div class="ttdeci">uniquePtr&lt; integration &gt; clone() const override</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth5_8hpp_source.html#l00108">AdamsBashforth5.hpp:108</a></div></div>
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-<div class="ttc" id="aclasspFlow_1_1pointField_html_afef304b4d4497e45857f6edef9b049e6"><div class="ttname"><a href="classpFlow_1_1pointField.html#afef304b4d4497e45857f6edef9b049e6">pFlow::pointField::activeRange</a></div><div class="ttdeci">range activeRange() const</div><div class="ttdef"><b>Definition:</b> <a href="pointField_8hpp_source.html#l00138">pointField.hpp:138</a></div></div>
 <div class="ttc" id="anamespacepFlow_html_a148d74ad0977268be8ea8b26a147f619"><div class="ttname"><a href="namespacepFlow.html#a148d74ad0977268be8ea8b26a147f619">pFlow::operator&lt;&lt;</a></div><div class="ttdeci">INLINE_FUNCTION iOstream &amp; operator&lt;&lt;(iOstream &amp;str, const AB3History &amp;ab3)</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00057">AdamsBashforth3.hpp:57</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1VectorSingle_html"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html">pFlow::VectorSingle</a></div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8hpp_source.html#l00044">VectorSingle.hpp:44</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsBashforth5_html_a889e2aac594d1f14b8d243497b521cb8"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth5.html#a889e2aac594d1f14b8d243497b521cb8">pFlow::AdamsBashforth5::~AdamsBashforth5</a></div><div class="ttdeci">virtual ~AdamsBashforth5()=default</div></div>
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+<div class="ttc" id="aclasspFlow_1_1integration_html_a10329e18307a60d3fdb203bcbed2b295"><div class="ttname"><a href="classpFlow_1_1integration.html#a10329e18307a60d3fdb203bcbed2b295">pFlow::integration::owner</a></div><div class="ttdeci">repository &amp; owner()</div><div class="ttdoc">Ref to the owner repository.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00129">integration.hpp:129</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1VectorSingle_html_a51122b76468e0c5f19ea69c5c0ca6cf4"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">pFlow::VectorSingle::deviceViewAll</a></div><div class="ttdeci">INLINE_FUNCTION_H auto &amp; deviceViewAll()</div><div class="ttdoc">Device view range [0,capcity)</div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8cpp_source.html#l00249">VectorSingle.cpp:249</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1token_html_a4aba281d025f1d580c3835d67656fd31a8042f41e6dc49acd5cf4e86844f79acb"><div class="ttname"><a href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31a8042f41e6dc49acd5cf4e86844f79acb">pFlow::token::BEGIN_LIST</a></div><div class="ttdeci">@ BEGIN_LIST</div><div class="ttdoc">End entry [isseparator].</div><div class="ttdef"><b>Definition:</b> <a href="token_8hpp_source.html#l00091">token.hpp:91</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1uniquePtr_html"><div class="ttname"><a href="classpFlow_1_1uniquePtr.html">pFlow::uniquePtr</a></div><div class="ttdef"><b>Definition:</b> <a href="uniquePtr_8hpp_source.html#l00042">uniquePtr.hpp:42</a></div></div>
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+<div class="ttc" id="apFlowMacros_8hpp_html_aa7d4742cdf24a3792276e669531d145c"><div class="ttname"><a href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a></div><div class="ttdeci">#define LAMBDA_HD</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00058">pFlowMacros.hpp:58</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html_a05cf94b87db6b7d4b9c2d2eb81592cf3"><div class="ttname"><a href="classpFlow_1_1integration.html#a05cf94b87db6b7d4b9c2d2eb81592cf3">pFlow::integration::method</a></div><div class="ttdeci">virtual word method() const =0</div><div class="ttdoc">return integration method</div></div>
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+<div class="ttc" id="aclasspFlow_1_1iOstream_html"><div class="ttname"><a href="classpFlow_1_1iOstream.html">pFlow::iOstream</a></div><div class="ttdoc">Interface class for any output stream.</div><div class="ttdef"><b>Definition:</b> <a href="iOstream_8hpp_source.html#l00059">iOstream.hpp:59</a></div></div>
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@@ -151,7 +151,7 @@ $(document).ready(function(){initNavTree('AdamsMoulton3_8cpp_source.html',''); i
 <div class="line"><a name="l00044"></a><span class="lineno">   44</span>&#160;            )</div>
 <div class="line"><a name="l00045"></a><span class="lineno">   45</span>&#160;        ),</div>
 <div class="line"><a name="l00046"></a><span class="lineno">   46</span>&#160;    dy0_(</div>
-<div class="line"><a name="l00047"></a><span class="lineno">   47</span>&#160;        owner.<a class="code" href="classpFlow_1_1repository.html#a5bbe8f5fd6ec57500bcbc3e5cd5c9cf4">emplaceObject</a>&lt;<a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&gt;(</div>
+<div class="line"><a name="l00047"></a><span class="lineno">   47</span>&#160;        owner.emplaceObject&lt;<a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&gt;(</div>
 <div class="line"><a name="l00048"></a><span class="lineno">   48</span>&#160;            <a class="code" href="classpFlow_1_1objectFile.html">objectFile</a>(</div>
 <div class="line"><a name="l00049"></a><span class="lineno">   49</span>&#160;                <a class="code" href="namespacepFlow.html#a12b4d93aa9730629403d73e84386bff5">groupNames</a>(<a class="code" href="namespacepFlow.html#a16a2137651b2c6b8ea4a8daf1d89ff61">baseName</a>,<span class="stringliteral">&quot;dy0&quot;</span>),</div>
 <div class="line"><a name="l00050"></a><span class="lineno">   50</span>&#160;                <span class="stringliteral">&quot;&quot;</span>,</div>
@@ -162,7 +162,7 @@ $(document).ready(function(){initNavTree('AdamsMoulton3_8cpp_source.html',''); i
 <div class="line"><a name="l00055"></a><span class="lineno">   55</span>&#160;            )</div>
 <div class="line"><a name="l00056"></a><span class="lineno">   56</span>&#160;        ),</div>
 <div class="line"><a name="l00057"></a><span class="lineno">   57</span>&#160;    dy1_(</div>
-<div class="line"><a name="l00058"></a><span class="lineno">   58</span>&#160;        owner.<a class="code" href="classpFlow_1_1repository.html#a5bbe8f5fd6ec57500bcbc3e5cd5c9cf4">emplaceObject</a>&lt;<a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&gt;(</div>
+<div class="line"><a name="l00058"></a><span class="lineno">   58</span>&#160;        owner.emplaceObject&lt;<a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&gt;(</div>
 <div class="line"><a name="l00059"></a><span class="lineno">   59</span>&#160;            <a class="code" href="classpFlow_1_1objectFile.html">objectFile</a>(</div>
 <div class="line"><a name="l00060"></a><span class="lineno">   60</span>&#160;                <a class="code" href="namespacepFlow.html#a12b4d93aa9730629403d73e84386bff5">groupNames</a>(<a class="code" href="namespacepFlow.html#a16a2137651b2c6b8ea4a8daf1d89ff61">baseName</a>,<span class="stringliteral">&quot;dy1&quot;</span>),</div>
 <div class="line"><a name="l00061"></a><span class="lineno">   61</span>&#160;                <span class="stringliteral">&quot;&quot;</span>,</div>
@@ -219,7 +219,7 @@ $(document).ready(function(){initNavTree('AdamsMoulton3_8cpp_source.html',''); i
 <div class="line"><a name="l00112"></a><span class="lineno">  112</span>&#160;    <span class="keyword">const</span> <a class="code" href="classpFlow_1_1indexContainer.html">int32IndexContainer</a>&amp; newIndices,</div>
 <div class="line"><a name="l00113"></a><span class="lineno">  113</span>&#160;    <span class="keyword">const</span> <a class="code" href="classpFlow_1_1Vector.html">realx3Vector</a>&amp; y)</div>
 <div class="line"><a name="l00114"></a><span class="lineno">  114</span>&#160;{</div>
-<div class="line"><a name="l00115"></a><span class="lineno">  115</span>&#160;    <a class="code" href="classpFlow_1_1AdamsMoulton3.html#a6c02e0d25a1b849255e67e72d1a9d026">y0_</a>.insertSetElement(newIndices, y);</div>
+<div class="line"><a name="l00115"></a><span class="lineno">  115</span>&#160;    <a class="code" href="classpFlow_1_1AdamsMoulton3.html#a6c02e0d25a1b849255e67e72d1a9d026">y0_</a>.<a class="code" href="classpFlow_1_1internalField.html#ae97e2279d720194a68a594a3edbc6763">insertSetElement</a>(newIndices, y);</div>
 <div class="line"><a name="l00116"></a><span class="lineno">  116</span>&#160;    </div>
 <div class="line"><a name="l00117"></a><span class="lineno">  117</span>&#160;    <span class="keywordflow">return</span> <span class="keyword">true</span>;</div>
 <div class="line"><a name="l00118"></a><span class="lineno">  118</span>&#160;}</div>
@@ -228,14 +228,14 @@ $(document).ready(function(){initNavTree('AdamsMoulton3_8cpp_source.html',''); i
 <div class="line"><a name="l00121"></a><span class="lineno">  121</span>&#160;    <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
 <div class="line"><a name="l00122"></a><span class="lineno">  122</span>&#160;    <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; y, </div>
 <div class="line"><a name="l00123"></a><span class="lineno">  123</span>&#160;    <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; dy, </div>
-<div class="line"><a name="l00124"></a><span class="lineno">  124</span>&#160;    <a class="code" href="namespacepFlow.html#a304d8581876270871949bf5d4755036a">range</a> activeRng)</div>
+<div class="line"><a name="l00124"></a><span class="lineno">  124</span>&#160;    range activeRng)</div>
 <div class="line"><a name="l00125"></a><span class="lineno">  125</span>&#160;{</div>
 <div class="line"><a name="l00126"></a><span class="lineno">  126</span>&#160; </div>
-<div class="line"><a name="l00127"></a><span class="lineno">  127</span>&#160;    <span class="keyword">auto</span> d_dy = dy.<a class="code" href="classpFlow_1_1VectorSingle.html#a18052bc1ad8ea07ea5b6205321cba10e">deviceVectorAll</a>();</div>
-<div class="line"><a name="l00128"></a><span class="lineno">  128</span>&#160;    <span class="keyword">auto</span> d_y  = y.<a class="code" href="classpFlow_1_1VectorSingle.html#a18052bc1ad8ea07ea5b6205321cba10e">deviceVectorAll</a>();</div>
-<div class="line"><a name="l00129"></a><span class="lineno">  129</span>&#160;    <span class="keyword">auto</span> d_y0 = y0_.deviceVectorAll();</div>
-<div class="line"><a name="l00130"></a><span class="lineno">  130</span>&#160;    <span class="keyword">auto</span> d_dy0 = dy0_.deviceVectorAll();</div>
-<div class="line"><a name="l00131"></a><span class="lineno">  131</span>&#160;    <span class="keyword">auto</span> d_dy1= dy1_.deviceVectorAll();</div>
+<div class="line"><a name="l00127"></a><span class="lineno">  127</span>&#160;    <span class="keyword">auto</span> d_dy = dy.<a class="code" href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">deviceViewAll</a>();</div>
+<div class="line"><a name="l00128"></a><span class="lineno">  128</span>&#160;    <span class="keyword">auto</span> d_y  = y.<a class="code" href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">deviceViewAll</a>();</div>
+<div class="line"><a name="l00129"></a><span class="lineno">  129</span>&#160;    <span class="keyword">auto</span> d_y0 = y0_.deviceViewAll();</div>
+<div class="line"><a name="l00130"></a><span class="lineno">  130</span>&#160;    <span class="keyword">auto</span> d_dy0 = dy0_.deviceViewAll();</div>
+<div class="line"><a name="l00131"></a><span class="lineno">  131</span>&#160;    <span class="keyword">auto</span> d_dy1= dy1_.deviceViewAll();</div>
 <div class="line"><a name="l00132"></a><span class="lineno">  132</span>&#160; </div>
 <div class="line"><a name="l00133"></a><span class="lineno">  133</span>&#160;    Kokkos::parallel_for(</div>
 <div class="line"><a name="l00134"></a><span class="lineno">  134</span>&#160;        <span class="stringliteral">&quot;AdamsMoulton3::predict&quot;</span>,</div>
@@ -254,15 +254,15 @@ $(document).ready(function(){initNavTree('AdamsMoulton3_8cpp_source.html',''); i
 <div class="line"><a name="l00147"></a><span class="lineno">  147</span>&#160;    <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
 <div class="line"><a name="l00148"></a><span class="lineno">  148</span>&#160;    <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; y, </div>
 <div class="line"><a name="l00149"></a><span class="lineno">  149</span>&#160;    <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; dy, </div>
-<div class="line"><a name="l00150"></a><span class="lineno">  150</span>&#160;    <a class="code" href="namespacepFlow.html#a304d8581876270871949bf5d4755036a">range</a> activeRng)</div>
+<div class="line"><a name="l00150"></a><span class="lineno">  150</span>&#160;    range activeRng)</div>
 <div class="line"><a name="l00151"></a><span class="lineno">  151</span>&#160;{</div>
 <div class="line"><a name="l00152"></a><span class="lineno">  152</span>&#160; </div>
-<div class="line"><a name="l00153"></a><span class="lineno">  153</span>&#160;    <span class="keyword">auto</span> d_dy = dy.<a class="code" href="classpFlow_1_1VectorSingle.html#a18052bc1ad8ea07ea5b6205321cba10e">deviceVectorAll</a>();</div>
-<div class="line"><a name="l00154"></a><span class="lineno">  154</span>&#160;    <span class="keyword">auto</span> d_y  = y.<a class="code" href="classpFlow_1_1VectorSingle.html#a18052bc1ad8ea07ea5b6205321cba10e">deviceVectorAll</a>();</div>
+<div class="line"><a name="l00153"></a><span class="lineno">  153</span>&#160;    <span class="keyword">auto</span> d_dy = dy.<a class="code" href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">deviceViewAll</a>();</div>
+<div class="line"><a name="l00154"></a><span class="lineno">  154</span>&#160;    <span class="keyword">auto</span> d_y  = y.<a class="code" href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">deviceViewAll</a>();</div>
 <div class="line"><a name="l00155"></a><span class="lineno">  155</span>&#160; </div>
-<div class="line"><a name="l00156"></a><span class="lineno">  156</span>&#160;    <span class="keyword">auto</span> d_dy0 = dy0_.deviceVectorAll();</div>
-<div class="line"><a name="l00157"></a><span class="lineno">  157</span>&#160;    <span class="keyword">auto</span> d_y0  = y0_.deviceVectorAll();</div>
-<div class="line"><a name="l00158"></a><span class="lineno">  158</span>&#160;    <span class="keyword">auto</span> d_dy1 = dy1_.deviceVectorAll();</div>
+<div class="line"><a name="l00156"></a><span class="lineno">  156</span>&#160;    <span class="keyword">auto</span> d_dy0 = dy0_.deviceViewAll();</div>
+<div class="line"><a name="l00157"></a><span class="lineno">  157</span>&#160;    <span class="keyword">auto</span> d_y0  = y0_.deviceViewAll();</div>
+<div class="line"><a name="l00158"></a><span class="lineno">  158</span>&#160;    <span class="keyword">auto</span> d_dy1 = dy1_.deviceViewAll();</div>
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@@ -282,34 +282,33 @@ $(document).ready(function(){initNavTree('AdamsMoulton3_8cpp_source.html',''); i
 <div class="line"><a name="l00175"></a><span class="lineno">  175</span>&#160;}</div>
 </div><!-- fragment --></div><!-- contents -->
 </div><!-- doc-content -->
-<div class="ttc" id="anamespacepFlow_html_a6192191c0e9c178a44ee1ac350fde476"><div class="ttname"><a href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">pFlow::real</a></div><div class="ttdeci">float real</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00046">builtinTypes.hpp:46</a></div></div>
-<div class="ttc" id="anamespacepFlow_html_a304d8581876270871949bf5d4755036a"><div class="ttname"><a href="namespacepFlow.html#a304d8581876270871949bf5d4755036a">pFlow::range</a></div><div class="ttdeci">kRange&lt; int &gt; range</div><div class="ttdef"><b>Definition:</b> <a href="KokkosTypes_8hpp_source.html#l00059">KokkosTypes.hpp:59</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a6192191c0e9c178a44ee1ac350fde476"><div class="ttname"><a href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">pFlow::real</a></div><div class="ttdeci">float real</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00045">builtinTypes.hpp:45</a></div></div>
 <div class="ttc" id="aAdamsMoulton3_8hpp_html"><div class="ttname"><a href="AdamsMoulton3_8hpp.html">AdamsMoulton3.hpp</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1integration_html"><div class="ttname"><a href="classpFlow_1_1integration.html">pFlow::integration</a></div><div class="ttdoc">Base class for integrating the first order ODE (IVP)</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00049">integration.hpp:49</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html"><div class="ttname"><a href="classpFlow_1_1integration.html">pFlow::integration</a></div><div class="ttdoc">Base class for integrating the first order ODE (IVP)</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00051">integration.hpp:51</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsMoulton3_html_ad0d8f6814b44931c5a758e93505e0a6e"><div class="ttname"><a href="classpFlow_1_1AdamsMoulton3.html#ad0d8f6814b44931c5a758e93505e0a6e">pFlow::AdamsMoulton3::AdamsMoulton3</a></div><div class="ttdeci">AdamsMoulton3(const word &amp;baseName, repository &amp;owner, const pointStructure &amp;pStruct, const word &amp;method)</div><div class="ttdoc">Construct from components.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsMoulton3_8cpp_source.html#l00026">AdamsMoulton3.cpp:26</a></div></div>
-<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00063">builtinTypes.hpp:63</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00064">builtinTypes.hpp:64</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsMoulton3_html_a152b752a6b7b37e70fa5e7c99a484783"><div class="ttname"><a href="classpFlow_1_1AdamsMoulton3.html#a152b752a6b7b37e70fa5e7c99a484783">pFlow::AdamsMoulton3::intAll</a></div><div class="ttdeci">bool intAll(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy, range activeRng)</div><div class="ttdoc">Integrate on all points in the active range.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsMoulton3_8cpp_source.html#l00146">AdamsMoulton3.cpp:146</a></div></div>
-<div class="ttc" id="anamespacepFlow_html_a477d522d35403bd985ae105bd759e9d1"><div class="ttname"><a href="namespacepFlow.html#a477d522d35403bd985ae105bd759e9d1">pFlow::zero3</a></div><div class="ttdeci">const realx3 zero3(0.0)</div><div class="ttdef"><b>Definition:</b> <a href="types_8hpp_source.html#l00097">types.hpp:97</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1repository_html_a5bbe8f5fd6ec57500bcbc3e5cd5c9cf4"><div class="ttname"><a href="classpFlow_1_1repository.html#a5bbe8f5fd6ec57500bcbc3e5cd5c9cf4">pFlow::repository::emplaceObject</a></div><div class="ttdeci">T &amp; emplaceObject(const objectFile &amp;objf, Args &amp;&amp;... args)</div><div class="ttdef"><b>Definition:</b> <a href="repositoryTemplates_8cpp_source.html#l00038">repositoryTemplates.cpp:38</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a477d522d35403bd985ae105bd759e9d1"><div class="ttname"><a href="namespacepFlow.html#a477d522d35403bd985ae105bd759e9d1">pFlow::zero3</a></div><div class="ttdeci">const realx3 zero3(0.0)</div><div class="ttdef"><b>Definition:</b> <a href="types_8hpp_source.html#l00137">types.hpp:137</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsMoulton3_html_ace46ff4fbe3c001c816dbc4f9f67606f"><div class="ttname"><a href="classpFlow_1_1AdamsMoulton3.html#ace46ff4fbe3c001c816dbc4f9f67606f">pFlow::AdamsMoulton3::rpIntegration</a></div><div class="ttdeci">Kokkos::RangePolicy&lt; DefaultExecutionSpace, Kokkos::Schedule&lt; Kokkos::Static &gt;, Kokkos::IndexType&lt; int32 &gt; &gt; rpIntegration</div><div class="ttdoc">Range policy for integration kernel.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsMoulton3_8hpp_source.html#l00056">AdamsMoulton3.hpp:56</a></div></div>
-<div class="ttc" id="anamespacepFlow_html_a16a2137651b2c6b8ea4a8daf1d89ff61"><div class="ttname"><a href="namespacepFlow.html#a16a2137651b2c6b8ea4a8daf1d89ff61">pFlow::baseName</a></div><div class="ttdeci">word baseName(const word &amp;w, char sep='.')</div><div class="ttdef"><b>Definition:</b> <a href="bTypesFunctions_8cpp_source.html#l00156">bTypesFunctions.cpp:156</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1pointField_html"><div class="ttname"><a href="classpFlow_1_1pointField.html">pFlow::pointField</a></div><div class="ttdef"><b>Definition:</b> <a href="pointField_8hpp_source.html#l00035">pointField.hpp:35</a></div></div>
-<div class="ttc" id="aclasspFlow_1_1pointStructure_html"><div class="ttname"><a href="classpFlow_1_1pointStructure.html">pFlow::pointStructure</a></div><div class="ttdef"><b>Definition:</b> <a href="pointStructure_8hpp_source.html#l00044">pointStructure.hpp:44</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1internalField_html_ae97e2279d720194a68a594a3edbc6763"><div class="ttname"><a href="classpFlow_1_1internalField.html#ae97e2279d720194a68a594a3edbc6763">pFlow::internalField::insertSetElement</a></div><div class="ttdeci">bool insertSetElement(uint32IndexContainer indices, const T &amp;val)</div><div class="ttdef"><b>Definition:</b> <a href="internalField_8hpp_source.html#l00181">internalField.hpp:181</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a16a2137651b2c6b8ea4a8daf1d89ff61"><div class="ttname"><a href="namespacepFlow.html#a16a2137651b2c6b8ea4a8daf1d89ff61">pFlow::baseName</a></div><div class="ttdeci">word baseName(const word &amp;w, char sep='.')</div><div class="ttdoc">Find the base in a group separated by &quot;.&quot; and return it.</div><div class="ttdef"><b>Definition:</b> <a href="bTypesFunctions_8cpp_source.html#l00185">bTypesFunctions.cpp:185</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointField_html"><div class="ttname"><a href="classpFlow_1_1pointField.html">pFlow::pointField</a></div><div class="ttdef"><b>Definition:</b> <a href="pointField_8hpp_source.html#l00033">pointField.hpp:33</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointStructure_html"><div class="ttname"><a href="classpFlow_1_1pointStructure.html">pFlow::pointStructure</a></div><div class="ttdef"><b>Definition:</b> <a href="pointStructure_8hpp_source.html#l00034">pointStructure.hpp:34</a></div></div>
 <div class="ttc" id="aclasspFlow_1_1AdamsMoulton3_html_a8da2088458d635dfa1fbe1823a3bfd6d"><div class="ttname"><a href="classpFlow_1_1AdamsMoulton3.html#a8da2088458d635dfa1fbe1823a3bfd6d">pFlow::AdamsMoulton3::setInitialVals</a></div><div class="ttdeci">bool setInitialVals(const int32IndexContainer &amp;newIndices, const realx3Vector &amp;y) override</div><div class="ttdoc">Set the initial values for new indices.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsMoulton3_8cpp_source.html#l00111">AdamsMoulton3.cpp:111</a></div></div>
-<div class="ttc" id="anamespacepFlow_html_aae6ad039f09c0676db11bd114136a3fa"><div class="ttname"><a href="namespacepFlow.html#aae6ad039f09c0676db11bd114136a3fa">pFlow::int32</a></div><div class="ttdeci">int int32</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00053">builtinTypes.hpp:53</a></div></div>
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+<div class="ttc" id="anamespacepFlow_html_aae6ad039f09c0676db11bd114136a3fa"><div class="ttname"><a href="namespacepFlow.html#aae6ad039f09c0676db11bd114136a3fa">pFlow::int32</a></div><div class="ttdeci">int int32</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00050">builtinTypes.hpp:50</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1VectorSingle_html"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html">pFlow::VectorSingle</a></div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8hpp_source.html#l00044">VectorSingle.hpp:44</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1objectFile_html"><div class="ttname"><a href="classpFlow_1_1objectFile.html">pFlow::objectFile</a></div><div class="ttdef"><b>Definition:</b> <a href="objectFile_8hpp_source.html#l00030">objectFile.hpp:30</a></div></div>
 <div class="ttc" id="asetPointStructure_8hpp_html_a385e32971df44b131e4498181a949a91"><div class="ttname"><a href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a></div><div class="ttdeci">auto &amp; pStruct</div><div class="ttdef"><b>Definition:</b> <a href="setPointStructure_8hpp_source.html#l00024">setPointStructure.hpp:24</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1AdamsMoulton3_html_ac755e4bf02c3732d1eb89de9e903ebdb"><div class="ttname"><a href="classpFlow_1_1AdamsMoulton3.html#ac755e4bf02c3732d1eb89de9e903ebdb">pFlow::AdamsMoulton3::correct</a></div><div class="ttdeci">bool correct(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy) override</div><div class="ttdef"><b>Definition:</b> <a href="AdamsMoulton3_8cpp_source.html#l00093">AdamsMoulton3.cpp:93</a></div></div>
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