/*------------------------------- phasicFlow --------------------------------- O C enter of O O E ngineering and O O M ultiscale modeling of OOOOOOO F luid flow ------------------------------------------------------------------------------ Copyright (C): www.cemf.ir email: hamid.r.norouzi AT gmail.com ------------------------------------------------------------------------------ Licence: This file is part of phasicFlow code. It is a free software for simulating granular and multiphase flows. You can redistribute it and/or modify it under the terms of GNU General Public License v3 or any other later versions. phasicFlow is distributed to help others in their research in the field of granular and multiphase flows, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. -----------------------------------------------------------------------------*/ #ifndef __NBS_H__ #define __NBS_H__ #include "cells.H" #include "contactSearchFunctions.H" namespace pFlow { template< typename executionSpace, typename idType, typename indexType=int32 > class NBS : public cells { public: using IdType = idType; using IndexType = indexType; using Cells = cells; using CellType = typename Cells::CellType; using ExecutionSpace= executionSpace; using memory_space = typename ExecutionSpace::memory_space; struct TagBuild{}; struct TagFindPairs{}; protected: int32 capacity_ = 1; real sizeRatio_ = 1.0; int32 updateFrequency_= 1; int32 currentIter_ = 0; bool performedSearch_ = false; ViewType1D pointPosition_; ViewType1D diameter_; ViewType3D head_; ViewType1D next_; INLINE_FUNCTION_H void nullify() { fill( head_, range(0,this->nx()), range(0,this->ny()), range(0,this->nz()), -1 ); fill( next_, range(0,capacity_), -1 ); } void nullify(range nextRng) { fill( head_, range(0,this->nx()), range(0,this->ny()), range(0,this->nz()), -1 ); fill( next_, nextRng, -1 ); } using mdrPolicyFindPairs = Kokkos::MDRangePolicy< Kokkos::Rank<3>, Kokkos::Schedule, ExecutionSpace>; private: void checkAllocateNext(int newCap) { if( capacity_ < newCap) { capacity_ = newCap; Kokkos::realloc(next_, capacity_); } } void allocateHead() { Kokkos::realloc(head_, this->nx(), this->ny(), this->nz()); } bool performSearch() { if(currentIter_ % updateFrequency_ == 0) { currentIter_++; return true; }else { currentIter_++; return false; } } static INLINE_FUNCTION_HD void Swap(int32& x, int32& y) { int32 tmp = x; x = y; y = tmp; } public: TypeNameNV("NBS"); NBS( const box& domain, real cellSize, const ViewType1D& position, const ViewType1D& diam, int32 initialContainerSize = 1) : Cells(domain, cellSize), pointPosition_(position), diameter_(diam), head_("NBS::head_",1,1,1), //, this->nx(), this->ny(), this->nz()), next_("NBS::next_",1) //,position.size()), { checkAllocateNext(pointPosition_.size()); allocateHead(); } NBS( dictionary dict, const box& domain, real cellSize, const ViewType1D& position, const ViewType1D& diam, int32 initialContainerSize = 1 ) : Cells(domain, cellSize), pointPosition_(position), diameter_(diam), head_("NBS::head_",1,1,1), //, this->nx(), this->ny(), this->nz()), next_("NBS::next_",1) //,position.size()), { updateFrequency_ = max( dict.getVal("updateFrequency"),1 ); sizeRatio_ = max(dict.getVal( "sizeRatio"),1.0); this->setCellSize(cellSize*sizeRatio_); checkAllocateNext(pointPosition_.size()); allocateHead(); } INLINE_FUNCTION_HD NBS(const NBS&) = default; INLINE_FUNCTION_HD NBS& operator = (const NBS&) = default; INLINE_FUNCTION_HD ~NBS()=default; //// - Methods bool enterBoadSearch()const { return currentIter_%updateFrequency_==0; } bool performedSearch()const { return performedSearch_; } // - Perform the broad search to find pairs // with force = true, perform broad search regardless of // updateFrequency_ value // on all the points in the range of [0,numPoints_) template bool broadSearch(PairsContainer& pairs, range activeRange, bool force=false) { if(force) currentIter_ = 0; performedSearch_ = false; if( !performSearch() ) return true; build(activeRange); findPairs(pairs); performedSearch_ = true; return true; } // - Perform the broad search to find pairs, // ignore particles with incld(i) = true, // with force = true, perform broad search regardless of // updateFrequency_ value template bool broadSearch(PairsContainer& pairs, range activeRange, IncludeFunction incld, bool force = false) { if(force) currentIter_ = 0; performedSearch_ = false; if( !performSearch() ) return true; build(activeRange, incld); findPairs(pairs); performedSearch_ = true; return true; } // - build based on all points in range [0, numPoints_) INLINE_FUNCTION_H void build(range activeRange) { checkAllocateNext(activeRange.second); nullify(activeRange); Cells cellIndex = static_cast(*this); auto points = pointPosition_; auto next = next_; auto head = head_; Kokkos::RangePolicy< Kokkos::IndexType, Kokkos::Schedule, ExecutionSpace> rPolicy(activeRange.first, activeRange.second); Kokkos::parallel_for( "NBS::build", rPolicy, LAMBDA_HD(int32 i){ CellType ind = cellIndex.pointIndex(points[i]); int32 old = Kokkos::atomic_exchange(&head(ind.x(), ind.y(), ind.z()), i); next[i] = old; }); Kokkos::fence(); } template INLINE_FUNCTION_H void build(range activeRange, IncludeFunction incld) { checkAllocateNext(activeRange.second); nullify(activeRange); Cells cellIndex = static_cast(*this); auto points = pointPosition_; auto next = next_; auto head = head_; Kokkos::RangePolicy< Kokkos::IndexType, Kokkos::Schedule, ExecutionSpace> rPolicy(activeRange.first, activeRange.second); Kokkos::parallel_for( "NBS::build", rPolicy, LAMBDA_HD(int32 i){ if( incld(i) ) { CellType ind = cellIndex.pointIndex(points[i]); auto old = Kokkos::atomic_exchange(&head(ind.x(), ind.y(), ind.z()), i); next[i] = old; } }); Kokkos::fence(); } template INLINE_FUNCTION_H bool findPairs(PairsContainer& pairs) { mdrPolicyFindPairs mdrPolicy( {0,0,0}, {this->nx(),this->ny(),this->nz()} ); int32 getFull = 1; // loop until the container size fits the numebr of contact pairs while (getFull > 0) { getFull = 0; Kokkos::parallel_reduce ( "NBS::broadSearch", mdrPolicy, CLASS_LAMBDA_HD(int32 i, int32 j, int32 k, int32& getFullUpdate){ #include "NBSLoop.H" }, getFull); if(getFull) { // - resize the container // note that getFull now shows the number of failed insertions. uint32 len = max(getFull,50) ; auto oldCap = pairs.capacity(); pairs.increaseCapacityBy(len); Info<< "The contact pair container capacity increased from "<< oldCap << " to "< -1 ) { auto p_m = pointPosition_[m]; auto d_m = sizeRatio_* diameter_[m]; // the same cell n = next_(m); while(n >-1) { auto p_n = pointPosition_[n]; auto d_n = sizeRatio_*diameter_[n]; if( sphereSphereCheck(p_m, p_n, d_m, d_n) ) { auto ln = n; auto lm = m; if(lm>ln) Swap(lm,ln); if( auto res = pairs_.insert(lm,ln); res <0) { getFullUpdate++; } } n = next_(n); } // neighbor cells CellType neighborCell; for(int32 ni=0; ni<13; ni++) { if(ni==0) neighborCell = currentCell + CellType( 0, 0,-1); else if(ni==1) neighborCell = currentCell + CellType(-1, 0,-1); else if(ni==2) neighborCell = currentCell + CellType(-1, 0, 0); else if(ni==3) neighborCell = currentCell + CellType(-1, 0, 1); else if(ni==4) neighborCell = currentCell + CellType( 0,-1,-1); else if(ni==5) neighborCell = currentCell + CellType( 0,-1, 0); else if(ni==6) neighborCell = currentCell + CellType( 0,-1, 1); else if(ni==7) neighborCell = currentCell + CellType(-1,-1,-1); else if(ni==8) neighborCell = currentCell + CellType(-1,-1, 0); else if(ni==9) neighborCell = currentCell + CellType(-1,-1, 1); else if(ni==10) neighborCell = currentCell + CellType( 1,-1,-1); else if(ni==11) neighborCell = currentCell + CellType( 1,-1, 0); else if(ni==12) neighborCell = currentCell + CellType( 1,-1, 1); if( this->isInRange(neighborCell) ) { n = head_(neighborCell.x(), neighborCell.y(), neighborCell.z()); while( n>-1) { auto p_n = pointPosition_[n]; auto d_n = sizeRatio_*diameter_[n]; if(sphereSphereCheck(p_m, p_n, d_m, d_n)) { auto ln = n; auto lm = m; if(lm>ln) Swap(lm,ln); if( auto res = pairs_.insert(lm,ln); res <0) { getFullUpdate++; } } n = next_[n]; } } } m = next_[m]; } }*/ template INLINE_FUNCTION_HD int32 addPointsInBoxToList( const teamMemberType& teamMember, IdType id, const iBox& triBox, const PairsContainer& pairs)const { int32 getFull = 0; auto bExtent = boxExtent(triBox); int32 numCellBox = bExtent.x()*bExtent.y()*bExtent.z(); const auto head = head_; const auto next = next_; // perform a loop over all cells in the triBox Kokkos::parallel_reduce( Kokkos::TeamThreadRange(teamMember,numCellBox), [=](int32 linIndex, int32& valToUpdate){ CellType cell; indexToCell(linIndex, triBox, cell); int32 n = head(cell.x(),cell.y(),cell.z()); while( n>-1) { // id is wall id the pair is (particle id, wall id) if( pairs.insert(static_cast(n), id) < 0 ) valToUpdate++; n = next(n); } }, getFull ); return getFull; } }; } #endif